RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CYSLTR1Q9Y271 337 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 DENND4CQ5VZ89 1909 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 HOXA3O43365 443 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-201ENST00000302516 TGIF1Q15583 401 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 EAF1Q96JC9 268 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-201ENST00000302516 ABCA1O95477 2261 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 TRAV8-2A0A0B4J237 113 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 TMEM238C9JI98 176 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 NDUFS8O00217 210 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 MYOD1P15172 320 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 SAP25Q8TEE9 199 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 IGKV3D-11A0A0A0MRZ8 115 aa6.43□□□□□ -1.38
SF3B3-201ENST00000302516 A0A1W2PRS3 328 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 H3BUT2 72 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 IGKCP01834 107 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 FOXA3P55318 350 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-201ENST00000302516 C18orf15Q96N68 181 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 IGHV3-72A0A0B4J1Y9 119 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 NKX2-8O15522 239 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 FAM89BQ8N5H3 189 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 NDUFA3O95167 84 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 ZNF124Q15973 351 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 SAMD5Q5TGI4 173 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 DTX1Q86Y01 620 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 FGF11Q92914 225 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 CCL19Q99731 98 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 C17orf98A8MV24 154 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 TIMP3P35625 211 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-201ENST00000302516 A8MWV9 139 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 ZNF883P0CG24 379 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 LAGE3Q14657 143 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 GAGE13Q4V321 117 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 KIAA1671Q9BY89 1806 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 ZNF407Q9C0G0 2248 aa6.42□□□□□ -1.38
SF3B3-201ENST00000302516 SHISA3A0PJX4 238 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 CELA2AP08217 269 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 APOBEC3AP31941 199 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-201ENST00000302516 TEX38Q6PEX7 206 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 ATRAIDQ6UW56 229 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 EPDR1Q9UM22 224 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 FOXA2Q9Y261 457 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-201ENST00000302516 SAA2-SAA4A0A096LPE2 208 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 TRBV7-9A0A0J9YWB2 115 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 SAA2P0DJI9 122 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-201ENST00000302516 ATP5G3P48201 142 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 CRYBA2P53672 197 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 ATXN8Q156A1 80 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 CFAP161Q6P656 301 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 PGPEP1Q9NXJ5 209 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 DPM3Q9P2X0 92 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 M0R381 172 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 C1orf194Q5T5A4 169 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 FAM19A2Q8N3H0 131 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 NEU4Q8WWR8 484 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-201ENST00000302516 C1QTNF9P0C862 333 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 PAX2Q02962 417 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 S100A7L2Q5SY68 101 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 FABP5P3A8MUU1 101 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 RHOGP84095 191 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 MIR17HGQ75NE6 70 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 ZIC4Q8N9L1 334 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 OR13C6PQ8NH95 151 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 TRGV3P03979 118 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 GPHA2Q96T91 129 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 MRPL27Q9P0M9 148 aaKnown RBP6.41□□□□□ -1.38
SF3B3-201ENST00000302516 IGHV2OR16-5A0A0B4J2B6 119 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 UPK2O00526 184 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 COX6B1P14854 86 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 PRCDQ00LT1 54 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 TNFRSF14Q92956 283 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 FBXL7Q9UJT9 491 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 EML6Q6ZMW3 1958 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 TRGV11A0A075B6L2 103 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 TFPI2P48307 235 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 SLC25A45Q8N413 288 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 COQ2Q96H96 371 aa6.41□□□□□ -1.38
SF3B3-201ENST00000302516 SLC25A39Q9BZJ4 359 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-201ENST00000302516 CHTOPQ9Y3Y2 248 aaKnown RBP6.41□□□□□ -1.38
SF3B3-201ENST00000302516 NBR2O15453 112 aa6.4□□□□□ -1.38
SF3B3-201ENST00000302516 C1QL2Q7Z5L3 287 aa6.4□□□□□ -1.38
SF3B3-201ENST00000302516 SPRED2Q7Z698 418 aa6.4□□□□□ -1.38
SF3B3-201ENST00000302516 COLCA2A8K830 154 aa6.4□□□□□ -1.38
SF3B3-201ENST00000302516 SRSF4Q08170 494 aaKnown RBP6.4□□□□□ -1.38
SF3B3-201ENST00000302516 DCTN5Q9BTE1 182 aa6.4□□□□□ -1.38
SF3B3-201ENST00000302516 IGLV3-19P01714 112 aa6.4□□□□□ -1.38
SF3B3-201ENST00000302516 IL9P15248 144 aa6.4□□□□□ -1.38
SF3B3-201ENST00000302516 RNASE4P34096 147 aaKnown RBP6.4□□□□□ -1.38
SF3B3-201ENST00000302516 PEMTQ9UBM1 199 aa6.4□□□□□ -1.38
SF3B3-201ENST00000302516 LEAP2Q969E1 77 aa6.4□□□□□ -1.39
SF3B3-201ENST00000302516 RNF125Q96EQ8 232 aa6.4□□□□□ -1.39
SF3B3-201ENST00000302516 RNASE7Q9H1E1 156 aaKnown RBP6.4□□□□□ -1.39
SF3B3-201ENST00000302516 NHP2Q9NX24 153 aaKnown RBP6.4□□□□□ -1.39
SF3B3-201ENST00000302516 MED12Q93074 2177 aa6.4□□□□□ -1.39
SF3B3-201ENST00000302516 COL4A5P29400 1685 aa6.4□□□□□ -1.39
SF3B3-201ENST00000302516 LDLRAD2Q5SZI1 272 aa6.4□□□□□ -1.39
SF3B3-201ENST00000302516 MORN3Q6PF18 240 aaPredicted RBP6.4□□□□□ -1.39
SF3B3-201ENST00000302516 PPP1R27Q86WC6 154 aa6.4□□□□□ -1.39
SF3B3-201ENST00000302516 DUX3Q96PT4 197 aa6.4□□□□□ -1.39
SF3B3-201ENST00000302516 SPSB2Q99619 263 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms