RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CYB5BO43169 146 aa8.36□□□□□ -1.07
CLCC1-201ENST00000302500 ATG12O94817 140 aa8.36□□□□□ -1.07
CLCC1-201ENST00000302500 APOHP02749 345 aaPredicted RBP8.36□□□□□ -1.07
CLCC1-201ENST00000302500 ERHP84090 104 aaKnown RBP8.36□□□□□ -1.07
CLCC1-201ENST00000302500 TMEM128Q5BJH2 165 aa8.36□□□□□ -1.07
CLCC1-201ENST00000302500 TOMM20LQ6UXN7 152 aa8.36□□□□□ -1.07
CLCC1-201ENST00000302500 GTSCR1Q86UQ5 136 aa8.36□□□□□ -1.07
CLCC1-201ENST00000302500 SGPP2Q8IWX5 399 aa8.36□□□□□ -1.07
CLCC1-201ENST00000302500 OR4X1Q8NH49 305 aa8.36□□□□□ -1.07
CLCC1-201ENST00000302500 RNF2Q99496 336 aa8.36□□□□□ -1.07
CLCC1-201ENST00000302500 SPAG8Q99932 426 aaPredicted RBP8.36□□□□□ -1.07
CLCC1-201ENST00000302500 PALMDQ9NP74 551 aa8.36□□□□□ -1.07
CLCC1-201ENST00000302500 U3KQE9 123 aa8.36□□□□□ -1.07
CLCC1-201ENST00000302500 OR11H12B2RN74 326 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 PRSS46E5RG02 174 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 IFNA17P01571 189 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 IGLC1P0CG04 106 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 TNFRSF9Q07011 255 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 PYDC2Q56P42 97 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 PRSS54Q6PEW0 395 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 TOMM5Q8N4H5 51 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 TMEM116Q8NCL8 245 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 DYNLRB2Q8TF09 96 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 RRNAD1Q96FB5 475 aaKnown RBP8.35□□□□□ -1.07
CLCC1-201ENST00000302500 SLC25A21Q9BQT8 299 aaPredicted RBP8.35□□□□□ -1.07
CLCC1-201ENST00000302500 MCUBQ9NWR8 336 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 GAR1Q9NY12 217 aaKnown RBP8.35□□□□□ -1.07
CLCC1-201ENST00000302500 KMT2AQ03164 3969 aa8.35□□□□□ -1.07
CLCC1-201ENST00000302500 AGRNO00468 2067 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 CORTO00230 105 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 PLA2G10O15496 165 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 ZNF207O43670 478 aaKnown RBP8.34□□□□□ -1.07
CLCC1-201ENST00000302500 CLN5O75503 358 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 SLC25A6P12236 298 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 CCR6P51684 374 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 PPP1R1AQ13522 171 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 Q56UQ5 140 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 UBAC2Q8NBM4 344 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 SRD5A3Q9H8P0 318 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 RETNQ9HD89 108 aa8.34□□□□□ -1.07
CLCC1-201ENST00000302500 IGKV1D-37A0A075B6S9 117 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 DUXBA0A1W2PPF3 345 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 NUPL2O15504 423 aaKnown RBP8.33□□□□□ -1.08
CLCC1-201ENST00000302500 NDUFB6O95139 128 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 SFT2D2O95562 160 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 SULT1A3P0DMM9 295 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 SULT1A4P0DMN0 295 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 AKR1C4P17516 323 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 CRYBB3P26998 211 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 S100A5P33763 92 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 HTR2BP41595 481 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 HOXA1P49639 335 aaPredicted RBP8.33□□□□□ -1.08
CLCC1-201ENST00000302500 AP3S2P59780 193 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 RELQ04864 619 aaPredicted RBP8.33□□□□□ -1.08
CLCC1-201ENST00000302500 SMCO1Q147U7 214 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 SLC24A4Q8NFF2 622 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 RNASEH2CQ8TDP1 164 aaKnown RBP8.33□□□□□ -1.08
CLCC1-201ENST00000302500 ST8SIA2Q92186 375 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 PINX1Q96BK5 328 aaKnown RBP8.33□□□□□ -1.08
CLCC1-201ENST00000302500 SCGB3A2Q96PL1 93 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 SPATA25Q9BR10 227 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 RHPN1-AS1Q9BWJ2 59 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 PUS1Q9Y606 427 aaKnown RBP eCLIP8.33□□□□□ -1.08
CLCC1-201ENST00000302500 VPS13DQ5THJ4 4388 aa8.33□□□□□ -1.08
CLCC1-201ENST00000302500 CCDC160A6NGH7 325 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 MPTX1A8MV57 137 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 IL7P13232 177 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 FAUP35544 74 aaKnown RBP8.32□□□□□ -1.08
CLCC1-201ENST00000302500 SNCAP37840 140 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 RBMS2Q15434 407 aaKnown RBP8.32□□□□□ -1.08
CLCC1-201ENST00000302500 GUCA2BQ16661 112 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 CASC10Q5T4H9 136 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 ZNF600Q6ZNG1 722 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 LGI3Q8N145 548 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 DUSP18Q8NEJ0 188 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 MUC7Q8TAX7 377 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 RBKSQ9H477 322 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 KCNIP3Q9Y2W7 256 aa8.32□□□□□ -1.08
CLCC1-201ENST00000302500 IGKV1OR2-108A0A075B7D4 117 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 C9orf170A2RU37 121 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 A6NHS1 94 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 C3orf84H3BNL1 204 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 GNG7O60262 68 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 NPBWR1P48145 328 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 UBE2MP61081 183 aaKnown RBP8.31□□□□□ -1.08
CLCC1-201ENST00000302500 SRPXP78539 464 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 SPANXN2Q5MJ10 180 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 FAM24BQ8N5W8 94 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 STPG3Q8N7X2 389 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 OR52B4Q8NGK2 314 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 OVOL2Q9BRP0 275 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 C20orf24Q9BUV8 137 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 FLVCR2Q9UPI3 526 aa8.31□□□□□ -1.08
CLCC1-201ENST00000302500 EPPK1P58107 5090 aaKnown RBP8.31□□□□□ -1.08
CLCC1-201ENST00000302500 IGHV3-49A0A0A0MS15 119 aa8.3□□□□□ -1.08
CLCC1-201ENST00000302500 TRAV14DV4A0A0A6YYC5 116 aa8.3□□□□□ -1.08
CLCC1-201ENST00000302500 FAM90A26D6RGX4 464 aa8.3□□□□□ -1.08
CLCC1-201ENST00000302500 NPY1RP25929 384 aa8.3□□□□□ -1.08
CLCC1-201ENST00000302500 OPRK1P41145 380 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms