RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 TSPAN9O75954 239 aa10.23□□□□□ -0.77
CCDC7-202ENST00000302316 TSPAN15O95858 294 aa10.23□□□□□ -0.77
CCDC7-202ENST00000302316 OR10J1P30954 320 aa10.23□□□□□ -0.77
CCDC7-202ENST00000302316 NPIPB3Q92617 1050 aa10.23□□□□□ -0.77
CCDC7-202ENST00000302316 A0A1B0GV50 99 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 I3L2K1 104 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 H2AFB1P0C5Y9 115 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 SRP14P37108 136 aaKnown RBP10.22□□□□□ -0.77
CCDC7-202ENST00000302316 B2MP61769 119 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 ACOT6Q3I5F7 207 aaPredicted RBP10.22□□□□□ -0.77
CCDC7-202ENST00000302316 Q6YL49 198 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 STPG3Q8N7X2 389 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 FAM110DQ8TAY7 271 aaPredicted RBP10.22□□□□□ -0.77
CCDC7-202ENST00000302316 YAE1D1Q9NRH1 226 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 IGLV11-55A0A075B6I3 123 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 MFSD2BA6NFX1 497 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 ZFP92A6NM28 416 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 M6PRP20645 277 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 RPL29P47914 159 aaKnown RBP10.22□□□□□ -0.77
CCDC7-202ENST00000302316 OR10G4Q8NGN3 311 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 OR10G9Q8NGN4 311 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 OR10G7Q8NGN6 311 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 RCC1LQ96I51 464 aaKnown RBP10.22□□□□□ -0.77
CCDC7-202ENST00000302316 TMEM68Q96MH6 324 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 FANCD2OSQ96PS1 177 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 VPREB3Q9UKI3 123 aa10.22□□□□□ -0.77
CCDC7-202ENST00000302316 K7EIM0 57 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 AKIRIN2Q53H80 203 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 GCSAMLQ5JQS6 135 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 IL34Q6ZMJ4 242 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 SLC35E3Q7Z769 313 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 RPP25LQ8N5L8 163 aaKnown RBP10.21□□□□□ -0.77
CCDC7-202ENST00000302316 THAP8Q8NA92 274 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 TMEM116Q8NCL8 245 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 BPIFCQ8NFQ6 507 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 LYPD6BQ8NI32 183 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 SFT2D1Q8WV19 159 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 MARC2Q969Z3 335 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 SLC39A9Q9NUM3 307 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 SLC45A2Q9UMX9 530 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 TLN2Q9Y4G6 2542 aa10.21□□□□□ -0.77
CCDC7-202ENST00000302316 NUDT19A8MXV4 375 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 G3V318 75 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 HOXA3O43365 443 aaPredicted RBP10.21□□□□□ -0.78
CCDC7-202ENST00000302316 YIF1AO95070 293 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 BLCAPP62952 87 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 PRR20EP86478 221 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 PRR20CP86479 221 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 PRR20DP86480 221 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 PRR20BP86481 221 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 PRR20AP86496 221 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 ZNF726P1Q15940 193 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 FAM122CQ6P4D5 195 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 CYP2G1PQ6ZSU1 146 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 SSX7Q7RTT5 188 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 SLC25A22Q9H936 323 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 THYN1Q9P016 225 aa10.21□□□□□ -0.78
CCDC7-202ENST00000302316 NOTCH2Q04721 2471 aa10.2□□□□□ -0.78
CCDC7-202ENST00000302316 MYO9AB2RTY4 2548 aa10.2□□□□□ -0.78
CCDC7-202ENST00000302316 TRAV41A0A0B4J266 112 aa10.2□□□□□ -0.78
CCDC7-202ENST00000302316 IGHG2P01859 326 aa10.2□□□□□ -0.78
CCDC7-202ENST00000302316 GATA2P23769 480 aaPredicted RBP10.2□□□□□ -0.78
CCDC7-202ENST00000302316 LCN15Q6UWW0 184 aa10.2□□□□□ -0.78
CCDC7-202ENST00000302316 ACTR3CQ9C0K3 210 aaPredicted RBP10.2□□□□□ -0.78
CCDC7-202ENST00000302316 PRDM13Q9H4Q3 707 aa10.2□□□□□ -0.78
CCDC7-202ENST00000302316 ZNF355PQ9NSJ1 428 aa10.2□□□□□ -0.78
CCDC7-202ENST00000302316 LINC00527Q9UJ94 153 aa10.2□□□□□ -0.78
CCDC7-202ENST00000302316 IGKV1D-37A0A075B6S9 117 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 TCRBV4S1A1TA0A5B7 111 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 EIF3GO75821 320 aaKnown RBP eCLIP10.19□□□□□ -0.78
CCDC7-202ENST00000302316 OR2J3O76001 311 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 HBE1P02100 147 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 HIST1H1BP16401 226 aaKnown RBP10.19□□□□□ -0.78
CCDC7-202ENST00000302316 HNF1AP20823 631 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 CRIP2P52943 208 aaPredicted RBP10.19□□□□□ -0.78
CCDC7-202ENST00000302316 SPSB3Q6PJ21 355 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 CTXND1A0A1B0GTU2 59 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 RAB19A4D1S5 217 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 MAP1LC3B2A6NCE7 125 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 IGF1P05019 195 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 LINC00869P0C866 280 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 CDC34P49427 236 aaPredicted RBP10.19□□□□□ -0.78
CCDC7-202ENST00000302316 DEFA5Q01523 94 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 ZNF90Q03938 601 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 SIGLECL1Q8N7X8 197 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 OR4X1Q8NH49 305 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 MAP1LC3BQ9GZQ8 125 aa10.19□□□□□ -0.78
CCDC7-202ENST00000302316 MXRA5Q9NR99 2828 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 NDUFB8O95169 186 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 S100A1P23297 94 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 Q6ZS46 218 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 EIF4E3Q8N5X7 224 aaKnown RBP10.18□□□□□ -0.78
CCDC7-202ENST00000302316 MBD3L1Q8WWY6 194 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 TRGV9Q99603 122 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 GSX1Q9H4S2 264 aaPredicted RBP10.18□□□□□ -0.78
CCDC7-202ENST00000302316 FBXL7Q9UJT9 491 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 S4R3C0 116 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 A0A1W2PPV4 95 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 I3L521 148 aa10.18□□□□□ -0.78
CCDC7-202ENST00000302316 HMGB3O15347 200 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms