RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 FAM53AQ6NSI3 398 aaPredicted RBP10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 Q6ZRM9 215 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 ZNF257Q9Y2Q1 563 aa10.5□□□□□ -0.73
SLC6A1-201ENST00000287766 ARFGEF3Q5TH69 2177 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 PSPNO60542 156 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 RPL8P62917 257 aaKnown RBP10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 UBE2V1Q13404 147 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 OCC1Q8TAD7 63 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 NPIPB3Q92617 1050 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 GATA2P23769 480 aaPredicted RBP10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 MPV17L2Q567V2 206 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 TCF24Q7RTU0 167 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 LRTM2Q8N967 370 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 LOXL4Q96JB6 756 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 CALYQ9NYX4 217 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 RBFOX2O43251 390 aaKnown RBP eCLIP10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 Q6ZT83 130 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 SPRR3Q9UBC9 169 aa10.49□□□□□ -0.73
SLC6A1-201ENST00000287766 FAM90A27PA6NNH2 459 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 PRR33A8MZF0 331 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 TMEM42Q69YG0 159 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 DTX1Q86Y01 620 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 IL6RP08887 468 aaPredicted RBP10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 TBR1Q16650 682 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 ZCCHC24Q8N2G6 241 aaKnown RBP10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 DIRC2Q96SL1 478 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 HIGD1CA8MV81 97 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 SRSF6Q13247 344 aaKnown RBP10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 C1orf185Q5T7R7 199 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 ACP7Q6ZNF0 438 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 SCNM1Q9BWG6 230 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 LTBP2Q14767 1821 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 IGKV1-6A0A0C4DH72 117 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 TMEM50AO95807 157 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 IL18BPO95998 194 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 PSG1P11464 419 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 C9orf106Q8NAJ2 232 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 ARHGAP21Q5T5U3 1957 aa10.48□□□□□ -0.73
SLC6A1-201ENST00000287766 TSPAN13O95857 204 aa10.47□□□□□ -0.73
SLC6A1-201ENST00000287766 NMSQ5H8A3 153 aa10.47□□□□□ -0.73
SLC6A1-201ENST00000287766 TEX38Q6PEX7 206 aa10.47□□□□□ -0.73
SLC6A1-201ENST00000287766 ZNF788Q6ZQV5 615 aa10.47□□□□□ -0.73
SLC6A1-201ENST00000287766 ANAPC13Q9BS18 74 aa10.47□□□□□ -0.73
SLC6A1-201ENST00000287766 ETV2O00321 342 aaPredicted RBP10.47□□□□□ -0.73
SLC6A1-201ENST00000287766 SELLP14151 372 aa10.47□□□□□ -0.73
SLC6A1-201ENST00000287766 PRB3Q04118 309 aaPredicted RBP10.47□□□□□ -0.73
SLC6A1-201ENST00000287766 ZNF503-AS2A6NEH8 195 aa10.47□□□□□ -0.73
SLC6A1-201ENST00000287766 IGKV1-5P01602 117 aa10.47□□□□□ -0.73
SLC6A1-201ENST00000287766 REG1AP05451 166 aa10.47□□□□□ -0.73
SLC6A1-201ENST00000287766 WDR31Q8NA23 367 aa10.46□□□□□ -0.73
SLC6A1-201ENST00000287766 ELOVL5Q9NYP7 299 aa10.46□□□□□ -0.73
SLC6A1-201ENST00000287766 RPL27AP46776 148 aaKnown RBP10.46□□□□□ -0.73
SLC6A1-201ENST00000287766 FAM27E3Q08E93 113 aa10.46□□□□□ -0.73
SLC6A1-201ENST00000287766 FOXF2Q12947 444 aa10.46□□□□□ -0.73
SLC6A1-201ENST00000287766 METRNQ9UJH8 293 aa10.46□□□□□ -0.73
SLC6A1-201ENST00000287766 IGHV3-35A0A0C4DH35 117 aa10.46□□□□□ -0.74
SLC6A1-201ENST00000287766 GAGE12BA1L429 117 aa10.46□□□□□ -0.74
SLC6A1-201ENST00000287766 IGFBP2P18065 325 aa10.46□□□□□ -0.74
SLC6A1-201ENST00000287766 C10orf126Q8N4M7 172 aa10.46□□□□□ -0.74
SLC6A1-201ENST00000287766 PIEZO2Q9H5I5 2752 aa10.46□□□□□ -0.74
SLC6A1-201ENST00000287766 FCGR2BP31994 310 aaPredicted RBP10.46□□□□□ -0.74
SLC6A1-201ENST00000287766 NRN1LQ496H8 165 aa10.46□□□□□ -0.74
SLC6A1-201ENST00000287766 SLC25A10Q9UBX3 287 aaPredicted RBP10.46□□□□□ -0.74
SLC6A1-201ENST00000287766 DENND4AQ7Z401 1863 aa10.46□□□□□ -0.74
SLC6A1-201ENST00000287766 YLPM1P49750 1951 aaKnown RBP10.46□□□□□ -0.74
SLC6A1-201ENST00000287766 TRAV8-2A0A0B4J237 113 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 LYL1P12980 280 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 ZNF497Q6ZNH5 498 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 FAM216BQ8N7L0 139 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 NEUROG1Q92886 237 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 MS4A5Q9H3V2 200 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 TRBV20OR9-2A0A075B6H5 130 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 A0A1B0GUS0 222 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 LYPD6Q86Y78 171 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 PRELID3AQ96N28 172 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 TMEM242Q9NWH2 141 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 IGKV3D-15A0A087WSY6 115 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 MOSP00540 346 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 HIST1H1AQ02539 215 aaPredicted RBP10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 MIR17HGQ75NE6 70 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 C1orf174Q8IYL3 243 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 M0QZ24 198 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 BMI1P35226 326 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 PEAR1Q5VY43 1037 aaPredicted RBP10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 FOXL2NBQ6ZUU3 175 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 ORAOV1Q8WV07 137 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 RAXQ9Y2V3 346 aa10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 LSM4Q9Y4Z0 139 aaKnown RBP10.45□□□□□ -0.74
SLC6A1-201ENST00000287766 ZGRF1Q86YA3 2104 aa10.44□□□□□ -0.74
SLC6A1-201ENST00000287766 RNFT1Q5M7Z0 435 aa10.44□□□□□ -0.74
SLC6A1-201ENST00000287766 RPP25LQ8N5L8 163 aaKnown RBP10.44□□□□□ -0.74
SLC6A1-201ENST00000287766 TEX29Q8N6K0 151 aa10.44□□□□□ -0.74
SLC6A1-201ENST00000287766 FOXC2Q99958 501 aa10.44□□□□□ -0.74
SLC6A1-201ENST00000287766 A0A087X0K7 114 aa10.44□□□□□ -0.74
SLC6A1-201ENST00000287766 A0A1B0GUT8 65 aa10.44□□□□□ -0.74
SLC6A1-201ENST00000287766 NBEAP1P0C6P0 100 aa10.44□□□□□ -0.74
SLC6A1-201ENST00000287766 CKS1BP61024 79 aa10.44□□□□□ -0.74
SLC6A1-201ENST00000287766 WDR82Q6UXN9 313 aa10.44□□□□□ -0.74
SLC6A1-201ENST00000287766 GRAMD2BQ96HH9 432 aa10.44□□□□□ -0.74
SLC6A1-201ENST00000287766 IGHV2OR16-5A0A0B4J2B6 119 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms