RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 HECTD1Q9ULT8 2610 aa16.69■□□□□ 0.26
YBX3-202ENST00000279550 TRAV20A0A0B4J274 112 aa16.69■□□□□ 0.26
YBX3-202ENST00000279550 COLCA2A8K830 154 aa16.69■□□□□ 0.26
YBX3-202ENST00000279550 ACTL6BO94805 426 aa16.69■□□□□ 0.26
YBX3-202ENST00000279550 STAG3L2P0CL84 134 aa16.69■□□□□ 0.26
YBX3-202ENST00000279550 STAG3L3P0CL85 134 aa16.69■□□□□ 0.26
YBX3-202ENST00000279550 ARL14EPLP0DKL9 152 aa16.69■□□□□ 0.26
YBX3-202ENST00000279550 SUB1P53999 127 aaKnown RBP eCLIP16.69■□□□□ 0.262e-9■■■■■ 67.4
YBX3-202ENST00000279550 PVRIGQ6DKI7 326 aa16.69■□□□□ 0.26
YBX3-202ENST00000279550 TVP23CQ96ET8 276 aa16.69■□□□□ 0.26
YBX3-202ENST00000279550 FOXC2Q99958 501 aa16.69■□□□□ 0.26
YBX3-202ENST00000279550 SEPSECSQ9HD40 501 aaKnown RBP16.69■□□□□ 0.26
YBX3-202ENST00000279550 SSX2Q16385 188 aa16.68■□□□□ 0.26
YBX3-202ENST00000279550 RUSC1-AS1Q66K80 236 aa16.68■□□□□ 0.26
YBX3-202ENST00000279550 WFDC11Q8NEX6 87 aa16.68■□□□□ 0.26
YBX3-202ENST00000279550 NIPSNAP3BQ9BS92 247 aa16.68■□□□□ 0.26
YBX3-202ENST00000279550 WNK2Q9Y3S1 2297 aa16.68■□□□□ 0.26
YBX3-202ENST00000279550 GATA3P23771 443 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 UBE2E1P51965 193 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 MMDQ15546 238 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 EAF1Q96JC9 268 aaPredicted RBP16.67■□□□□ 0.26
YBX3-202ENST00000279550 LGALS4P56470 323 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 UBE2G2P60604 165 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 RHOBP62745 196 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 SPNS3Q6ZMD2 512 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 MIR17HGQ75NE6 70 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 ZNF114Q8NC26 417 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 OR4F5Q8NH21 305 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 ISOC2Q96AB3 205 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 OR4F4Q96R69 305 aa16.67■□□□□ 0.26
YBX3-202ENST00000279550 NBR2O15453 112 aa16.66■□□□□ 0.26
YBX3-202ENST00000279550 MOSP00540 346 aa16.66■□□□□ 0.26
YBX3-202ENST00000279550 TAGLN2P37802 199 aaKnown RBP16.66■□□□□ 0.26
YBX3-202ENST00000279550 PLGLAQ15195 96 aa16.66■□□□□ 0.26
YBX3-202ENST00000279550 SRSF12Q8WXF0 261 aaKnown RBP16.66■□□□□ 0.26
YBX3-202ENST00000279550 NPIPB3Q92617 1050 aa16.66■□□□□ 0.26
YBX3-202ENST00000279550 IGKV1D-37A0A075B6S9 117 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 CXorf1O96002 111 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 IGHV4-31P0DP07 118 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 ATP5G3P48201 142 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 CYP2G1PQ6ZSU1 146 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 MISP3Q96FF7 219 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 C7orf69Q9H7B7 122 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 DMRT1Q9Y5R6 373 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 ITPR2Q14571 2701 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 ZNF727A8MUV8 499 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 NDUFA3O95167 84 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 CRYGCP07315 174 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 NPPCP23582 126 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 GCHFRP30047 84 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 MINOS1Q5TGZ0 78 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 MRPL41Q8IXM3 137 aaKnown RBP16.65■□□□□ 0.26
YBX3-202ENST00000279550 THAP8Q8NA92 274 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 NPBQ8NG41 125 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 AJUBAQ96IF1 538 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 MINOS1-NBL1R4GNA1 71 aa16.65■□□□□ 0.26
YBX3-202ENST00000279550 PRRC2AP48634 2157 aaKnown RBP16.64■□□□□ 0.25
YBX3-202ENST00000279550 CENPVL3A0A0U1RRI6 287 aa16.64■□□□□ 0.25
YBX3-202ENST00000279550 C11orf94C9JXX5 98 aa16.64■□□□□ 0.25
YBX3-202ENST00000279550 TMEM250H0YL14 139 aa16.64■□□□□ 0.25
YBX3-202ENST00000279550 TGFAP01135 160 aa16.64■□□□□ 0.25
YBX3-202ENST00000279550 RND2P52198 227 aa16.64■□□□□ 0.25
YBX3-202ENST00000279550 FAM78BQ5VT40 261 aa16.64■□□□□ 0.25
YBX3-202ENST00000279550 C15orf54Q8N8G6 183 aa16.64■□□□□ 0.25
YBX3-202ENST00000279550 HIST1H2BAQ96A08 127 aa16.64■□□□□ 0.25
YBX3-202ENST00000279550 RPUSD4Q96CM3 377 aaKnown RBP16.64■□□□□ 0.25
YBX3-202ENST00000279550 SDF2L1Q9HCN8 221 aa16.64■□□□□ 0.25
YBX3-202ENST00000279550 CR1P17927 2039 aa16.63■□□□□ 0.25
YBX3-202ENST00000279550 HES1Q14469 280 aa16.63■□□□□ 0.25
YBX3-202ENST00000279550 ZNF674Q2M3X9 581 aa16.63■□□□□ 0.25
YBX3-202ENST00000279550 SLC25A33Q9BSK2 321 aa16.63■□□□□ 0.25
YBX3-202ENST00000279550 TUBA4BQ9H853 241 aa16.63■□□□□ 0.25
YBX3-202ENST00000279550 FUT9Q9Y231 359 aa16.63■□□□□ 0.25
YBX3-202ENST00000279550 TBL2Q9Y4P3 447 aaKnown RBP16.63■□□□□ 0.25
YBX3-202ENST00000279550 F11RQ9Y624 299 aaKnown RBP16.63■□□□□ 0.25
YBX3-202ENST00000279550 IGHV3-21A0A0B4J1V1 117 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 PSMB11A5LHX3 300 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 OOSP1A8MZH6 123 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 NDUFS6O75380 124 aaKnown RBP16.62■□□□□ 0.25
YBX3-202ENST00000279550 ZNF90Q03938 601 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 KIAA0141Q14154 515 aaPredicted RBP16.62■□□□□ 0.25
YBX3-202ENST00000279550 CST9LP1Q5W188 147 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 Q8N6K4 173 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 OR2T10Q8NGZ9 312 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 OR1P1Q8NH06 330 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 SMIM7Q9BQ49 75 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 YTHDF2Q9Y5A9 579 aaKnown RBP16.62■□□□□ 0.25
YBX3-202ENST00000279550 TRAV40A0A0B4J280 105 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 OR5G3P0C626 314 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 SAA4P35542 130 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 CCDC144NLQ6NUI1 221 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 TMEM37Q8WXS4 190 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 YPEL4Q96NS1 127 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 PARLQ9H300 379 aa16.62■□□□□ 0.25
YBX3-202ENST00000279550 A0A087WWC5 75 aa16.61■□□□□ 0.25
YBX3-202ENST00000279550 TCRBV4S1A1TA0A5B7 111 aa16.61■□□□□ 0.25
YBX3-202ENST00000279550 NPFFO15130 113 aa16.61■□□□□ 0.25
YBX3-202ENST00000279550 C5orf64Q2M2E5 130 aa16.61■□□□□ 0.25
YBX3-202ENST00000279550 CIARTQ8N365 385 aaPredicted RBP16.61■□□□□ 0.25
YBX3-202ENST00000279550 ZNF503Q96F45 646 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms