RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 CCL1P22362 96 aa16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 ALX4Q9H161 411 aaPredicted RBP16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 FABP5P3A8MUU1 101 aa16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 RREB1Q92766 1687 aa16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 PUSL1Q8N0Z8 303 aaKnown RBP16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 NHP2Q9NX24 153 aaKnown RBP16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 PIN1P1O15428 100 aa16.92■□□□□ 0.3
CACNA1B-201ENST00000277549 KIAA1217Q5T5P2 1943 aa16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 GPX4P36969 197 aaPredicted RBP16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 C15orf32Q32M92 178 aa16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 TMEM155Q4W5P6 130 aa16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 SPCS1Q9Y6A9 102 aa16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 TRAV13-1A0A0B4J241 112 aa16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 NCR2O95944 276 aa16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 IGHV3-16A0A0C4DH30 117 aa16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 IL36BQ9NZH7 164 aa16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 KIAA1551Q9HCM1 1747 aa16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 MPTX1A8MV57 137 aa16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 SELLP14151 372 aa16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 KLF17Q5JT82 389 aaPredicted RBP16.91■□□□□ 0.3
CACNA1B-201ENST00000277549 IGHMP01871 453 aa16.9■□□□□ 0.3
CACNA1B-201ENST00000277549 OTORQ9NRC9 128 aa16.9■□□□□ 0.3
CACNA1B-201ENST00000277549 TRAV8-4A0A0B4J246 113 aa16.9■□□□□ 0.3
CACNA1B-201ENST00000277549 A0A1B0GV90 55 aa16.9■□□□□ 0.3
CACNA1B-201ENST00000277549 ZNF660Q6AZW8 331 aaPredicted RBP16.9■□□□□ 0.3
CACNA1B-201ENST00000277549 MBNL3Q9NUK0 354 aaKnown RBP16.9■□□□□ 0.3
CACNA1B-201ENST00000277549 POLR2AP24928 1970 aaKnown RBP16.9■□□□□ 0.3
CACNA1B-201ENST00000277549 AKAP11Q9UKA4 1901 aa16.9■□□□□ 0.3
CACNA1B-201ENST00000277549 ZNF876PQ49A33 203 aa16.9■□□□□ 0.3
CACNA1B-201ENST00000277549 TRBV5-7A0A0A0MS05 114 aa16.9■□□□□ 0.3
CACNA1B-201ENST00000277549 C1orf159Q96HA4 380 aa16.9■□□□□ 0.3
CACNA1B-201ENST00000277549 IQCF6A8MYZ5 107 aa16.89■□□□□ 0.3
CACNA1B-201ENST00000277549 IGHV1-46P01743 117 aa16.89■□□□□ 0.3
CACNA1B-201ENST00000277549 NEUROG1Q92886 237 aa16.89■□□□□ 0.3
CACNA1B-201ENST00000277549 NAPSAO96009 420 aa16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 FOXL1Q12952 345 aa16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 FOCADQ5VW36 1801 aa16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 MBD3L4A6NDZ8 208 aaPredicted RBP16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 MBD3L3A6NE82 208 aaPredicted RBP16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 MBD3L5A6NJ08 208 aaPredicted RBP16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 SRSF1Q07955 248 aaKnown RBP eCLIP16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 TMEM30BQ3MIR4 351 aa16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 MBD3L2Q8NHZ7 208 aaPredicted RBP16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 QSER1Q2KHR3 1735 aa16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 H3BUT2 72 aa16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 OR9G9P0C7N8 305 aa16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 H2BFSP57053 126 aa16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 TRPM3Q9HCF6 1732 aaPredicted RBP16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 C10orf55Q5SWW7 151 aa16.89■□□□□ 0.29
CACNA1B-201ENST00000277549 MRPS18AQ9NVS2 196 aaKnown RBP16.88■□□□□ 0.29
CACNA1B-201ENST00000277549 MAP1BP46821 2468 aaKnown RBP16.88■□□□□ 0.29
CACNA1B-201ENST00000277549 NAT1P18440 290 aa16.88■□□□□ 0.29
CACNA1B-201ENST00000277549 DMRTC2Q8IXT2 367 aaPredicted RBP16.88■□□□□ 0.29
CACNA1B-201ENST00000277549 LRP5O75197 1615 aa16.88■□□□□ 0.29
CACNA1B-201ENST00000277549 TRBV5-3A0A0A0MS03 114 aa16.88■□□□□ 0.29
CACNA1B-201ENST00000277549 UPK2O00526 184 aa16.88■□□□□ 0.29
CACNA1B-201ENST00000277549 CFHR5Q9BXR6 569 aa16.88■□□□□ 0.29
CACNA1B-201ENST00000277549 A0A087WWL8 130 aa16.88■□□□□ 0.29
CACNA1B-201ENST00000277549 Q5BKY6 102 aa16.88■□□□□ 0.29
CACNA1B-201ENST00000277549 RCC1LQ96I51 464 aaKnown RBP16.87■□□□□ 0.29
CACNA1B-201ENST00000277549 E9PLN8 166 aa16.87■□□□□ 0.29
CACNA1B-201ENST00000277549 IGHV2-26A0A0B4J1V2 119 aa16.87■□□□□ 0.29
CACNA1B-201ENST00000277549 PGPEP1LA6NFU8 196 aa16.87■□□□□ 0.29
CACNA1B-201ENST00000277549 M0R2P5 195 aa16.87■□□□□ 0.29
CACNA1B-201ENST00000277549 C6orf226Q5I0X4 101 aa16.87■□□□□ 0.29
CACNA1B-201ENST00000277549 EXOC3-AS1Q8N2X6 119 aa16.87■□□□□ 0.29
CACNA1B-201ENST00000277549 CIARTQ8N365 385 aaPredicted RBP16.87■□□□□ 0.29
CACNA1B-201ENST00000277549 RPUSD1Q9UJJ7 312 aaKnown RBP16.87■□□□□ 0.29
CACNA1B-201ENST00000277549 ZNF114Q8NC26 417 aa16.86■□□□□ 0.29
CACNA1B-201ENST00000277549 ANAPC10Q9UM13 185 aa16.86■□□□□ 0.29
CACNA1B-201ENST00000277549 CYSLTR1Q9Y271 337 aa16.86■□□□□ 0.29
CACNA1B-201ENST00000277549 DANCRP0C864 163 aa16.86■□□□□ 0.29
CACNA1B-201ENST00000277549 SYNJ2BPP57105 145 aa16.86■□□□□ 0.29
CACNA1B-201ENST00000277549 MORN2Q502X0 79 aa16.86■□□□□ 0.29
CACNA1B-201ENST00000277549 KNCNA6PVL3 124 aa16.86■□□□□ 0.29
CACNA1B-201ENST00000277549 C1orf100Q5SVJ3 147 aa16.86■□□□□ 0.29
CACNA1B-201ENST00000277549 MSRB2Q9Y3D2 182 aa16.86■□□□□ 0.29
CACNA1B-201ENST00000277549 BCORQ6W2J9 1755 aa16.86■□□□□ 0.29
CACNA1B-201ENST00000277549 ZNF600Q6ZNG1 722 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 TRBV9A0A0B4J1U6 114 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 SRRM4A7MD48 611 aaKnown RBP16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 F8VVB4 439 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 F8VWA3 439 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 EFNA4P52798 201 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 PSG8Q9UQ74 426 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 DSCR9P59020 149 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 SLC50A1Q9BRV3 221 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 ANKRD31Q8N7Z5 1873 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 TMEM200BQ69YZ2 307 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 A0A0G2JNJ9 132 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 STAG3L3P0CL85 134 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 ADMP35318 185 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 Q9UFV3 132 aa16.85■□□□□ 0.29
CACNA1B-201ENST00000277549 ERCC8Q13216 396 aa16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 PRR30Q53SZ7 412 aaPredicted RBP16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 PEF1Q9UBV8 284 aaKnown RBP16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 TPRP12270 2363 aaKnown RBP16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 IZUMO1RA6ND01 250 aa16.84■□□□□ 0.29
CACNA1B-201ENST00000277549 EREGO14944 169 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms