RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 HIGD1CA8MV81 97 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 TOX4O94842 621 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 CECR9P0C854 216 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 MOGAT3Q86VF5 341 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 ORAOV1Q8WV07 137 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 TNFRSF19Q9NS68 423 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 CALYQ9NYX4 217 aa10.55□□□□□ -0.72
COL8A1-202ENST00000273342 INTS1Q8N201 2190 aaKnown RBP10.55□□□□□ -0.72
COL8A1-202ENST00000273342 TACC2O95359 2948 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 PTPRBP23467 1997 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 SMIM27A0A1W2PRY6 76 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 IZUMO1RA6ND01 250 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 SRRM4A7MD48 611 aaKnown RBP10.54□□□□□ -0.72
COL8A1-202ENST00000273342 KLRC4-KLRK1H3BQV0 150 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 SPRY3O43610 288 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 TNFSF15O95150 251 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 APELAP0DMC3 54 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 REG1BP48304 166 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 PPOXP50336 477 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 KLF3P57682 345 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-202ENST00000273342 SELENOVP59797 346 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 SRSF6Q13247 344 aaKnown RBP10.54□□□□□ -0.72
COL8A1-202ENST00000273342 C1orf210Q8IVY1 113 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 NUDT10Q8NFP7 164 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 NUDT11Q96G61 164 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 KLF13Q9Y2Y9 288 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-202ENST00000273342 AMMECR1Q9Y4X0 333 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-202ENST00000273342 TRAV9-2A0A087WT02 112 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 UBE2G1P62253 170 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 ZNF841Q6ZN19 808 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 C19orf35Q6ZS72 473 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 FAM90A1Q86YD7 464 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 CHODLQ9H9P2 273 aa10.54□□□□□ -0.72
COL8A1-202ENST00000273342 MMP23AO75900 390 aa10.53□□□□□ -0.72
COL8A1-202ENST00000273342 JPT1Q9UK76 154 aa10.53□□□□□ -0.72
COL8A1-202ENST00000273342 LY96Q9Y6Y9 160 aa10.53□□□□□ -0.72
COL8A1-202ENST00000273342 IGHV2OR16-5A0A0B4J2B6 119 aa10.53□□□□□ -0.72
COL8A1-202ENST00000273342 A0A1W2PNU3 283 aaPredicted RBP10.53□□□□□ -0.72
COL8A1-202ENST00000273342 VWC2LB2RUY7 222 aa10.53□□□□□ -0.72
COL8A1-202ENST00000273342 NUDT3O95989 172 aa10.53□□□□□ -0.72
COL8A1-202ENST00000273342 OR5B3Q8NH48 314 aa10.53□□□□□ -0.72
COL8A1-202ENST00000273342 IGF2BP2-AS1Q96M15 143 aa10.53□□□□□ -0.72
COL8A1-202ENST00000273342 TMEM14BQ9NUH8 114 aa10.53□□□□□ -0.72
COL8A1-202ENST00000273342 CSN3P07498 182 aa10.52□□□□□ -0.72
COL8A1-202ENST00000273342 C8orf88P0DMB2 117 aa10.52□□□□□ -0.72
COL8A1-202ENST00000273342 MSMPQ1L6U9 139 aa10.52□□□□□ -0.72
COL8A1-202ENST00000273342 PRR7Q8TB68 274 aa10.52□□□□□ -0.72
COL8A1-202ENST00000273342 SLC25A33Q9BSK2 321 aa10.52□□□□□ -0.72
COL8A1-202ENST00000273342 IGHV3-21A0A0B4J1V1 117 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 IGHV2-26A0A0B4J1V2 119 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 OR2T8A6NH00 312 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 OR4C46A6NHA9 309 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 TNFSF4P23510 183 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 C10orf55Q5SWW7 151 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 LDLRAD2Q5SZI1 272 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 GCSAMQ8N6F7 178 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 OR4F17Q8NGA8 305 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 VPS25Q9BRG1 176 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 TAS2R45P59539 299 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 AARDQ4LEZ3 155 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 TMEM164Q5U3C3 297 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 OR2V2Q96R30 315 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 ASCL2Q99929 193 aa10.52□□□□□ -0.73
COL8A1-202ENST00000273342 TRGV8A0A0C4DH27 118 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 E7EUB6 86 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 MGST3O14880 152 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 REG1AP05451 166 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 TBR1Q16650 682 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 ZNF596Q8TC21 504 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 DDB2Q92466 427 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 IGLC7A0M8Q6 106 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 C2orf70A6NJV1 201 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 PSG1P11464 419 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 CCL11P51671 97 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 COTL1Q14019 142 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 SSX8Q7RTT4 187 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 SLC25A2Q9BXI2 301 aa10.51□□□□□ -0.73
COL8A1-202ENST00000273342 CSMD1Q96PZ7 3565 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 TEX50A0A1B0GTY4 177 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 ORM2P19652 201 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 DEFB123Q8N688 67 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 CORO2AQ92828 525 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 PGLYRP4Q96LB8 373 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 SLC25A10Q9UBX3 287 aaPredicted RBP10.5□□□□□ -0.73
COL8A1-202ENST00000273342 FOXA2Q9Y261 457 aaPredicted RBP10.5□□□□□ -0.73
COL8A1-202ENST00000273342 MRPS16Q9Y3D3 137 aaKnown RBP10.5□□□□□ -0.73
COL8A1-202ENST00000273342 DSCAMO60469 2012 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 MUC21A0A0G2JKD1 596 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 MUC21A0A140T8X8 626 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 COX7A2P2O60397 106 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 MUC21Q5SSG8 566 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 INO80CQ6PI98 192 aaPredicted RBP10.5□□□□□ -0.73
COL8A1-202ENST00000273342 SAP30LQ9HAJ7 183 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 C17orf58Q2M2W7 97 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 OR8B3Q8NGG8 313 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 NPIPB3Q92617 1050 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 URB1-AS1Q96HZ7 61 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 TMEM70Q9BUB7 260 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
COL8A1-202ENST00000273342 RELNP78509 3460 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms