RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 NPIPB3Q92617 1050 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 C7orf69Q9H7B7 122 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 SEPSECSQ9HD40 501 aaKnown RBP9.58□□□□□ -0.88
SDE2-201ENST00000272091 IGHV3-21A0A0B4J1V1 117 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 IGHV7-81A0A0B4J1V7 117 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 PSMB11A5LHX3 300 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 CNIH1O95406 144 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 PMS2P11Q13670 270 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 ZNF562Q6V9R5 426 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 RXFP4Q8TDU9 374 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 HSPB9Q9BQS6 159 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 I3L2K1 104 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 FAM106CPP0CH98 169 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 BCL2P10415 239 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 LRRC75A-AS1Q8N1F1 130 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 ABHD5Q8WTS1 349 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 SLC35E1Q96K37 410 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 WNT10AQ9GZT5 417 aa9.58□□□□□ -0.88
SDE2-201ENST00000272091 MAP1AP78559 2803 aaPredicted RBP9.58□□□□□ -0.88
SDE2-201ENST00000272091 ZFP92A6NM28 416 aa9.57□□□□□ -0.88
SDE2-201ENST00000272091 SOX15O60248 233 aa9.57□□□□□ -0.88
SDE2-201ENST00000272091 NPBWR1P48145 328 aa9.57□□□□□ -0.88
SDE2-201ENST00000272091 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.57□□□□□ -0.88
SDE2-201ENST00000272091 SLC35B3Q9H1N7 401 aa9.57□□□□□ -0.88
SDE2-201ENST00000272091 CYB5BO43169 146 aa9.57□□□□□ -0.88
SDE2-201ENST00000272091 RND2P52198 227 aa9.57□□□□□ -0.88
SDE2-201ENST00000272091 ZNF90Q03938 601 aa9.57□□□□□ -0.88
SDE2-201ENST00000272091 RNF223E7ERA6 249 aa9.57□□□□□ -0.88
SDE2-201ENST00000272091 MRPL41Q8IXM3 137 aaKnown RBP9.57□□□□□ -0.88
SDE2-201ENST00000272091 ARPC1AQ92747 370 aa9.57□□□□□ -0.88
SDE2-201ENST00000272091 MEGF9Q9H1U4 602 aa9.57□□□□□ -0.88
SDE2-201ENST00000272091 TRAV20A0A0B4J274 112 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 MT-CO2P00403 227 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 LOXL1Q08397 574 aaPredicted RBP9.56□□□□□ -0.88
SDE2-201ENST00000272091 KHDC3LQ587J8 217 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 Q5PR19 223 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 CYP2G1PQ6ZSU1 146 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 LINC01356Q8N9X3 169 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 NUPL2O15504 423 aaKnown RBP9.56□□□□□ -0.88
SDE2-201ENST00000272091 HLA-DRB1P01911 266 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 HSPB1P04792 205 aaKnown RBP9.56□□□□□ -0.88
SDE2-201ENST00000272091 STAG3L2P0CL84 134 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 STAG3L3P0CL85 134 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 BRS3P32247 399 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 SMDT1Q9H4I9 107 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 KCNIP2Q9NS61 270 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 PTPN13Q12923 2485 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 SH2D7A6NKC9 451 aaPredicted RBP9.56□□□□□ -0.88
SDE2-201ENST00000272091 CTAG1AP78358 180 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 TMEM249Q2WGJ8 235 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 CYB561D1Q8N8Q1 229 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 TMEM116Q8NCL8 245 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 NKX6-2Q9C056 277 aaPredicted RBP9.56□□□□□ -0.88
SDE2-201ENST00000272091 GSX1Q9H4S2 264 aaPredicted RBP9.56□□□□□ -0.88
SDE2-201ENST00000272091 K7EIM0 57 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 AMY1AP04745 511 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 CD81P60033 236 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 RAB31Q13636 194 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 TMEM37Q8WXS4 190 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 FANCD2OSQ96PS1 177 aa9.56□□□□□ -0.88
SDE2-201ENST00000272091 TCRBV4S1A1TA0A5B7 111 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 LINC01548A6NM66 108 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 MORN5Q5VZ52 161 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 MIR17HGQ75NE6 70 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 TMEM219Q86XT9 240 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 SVBPQ8N300 66 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 C5orf56Q8N8D9 126 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 MBD6Q96DN6 1003 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.55□□□□□ -0.884e-10■■■■■ 31.3
SDE2-201ENST00000272091 NPIPB5A8MRT5 1133 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 ARL14EPLP0DKL9 152 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 IGHV4-31P0DP07 118 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 TTC9CQ8N5M4 171 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 DOPEY2Q9Y3R5 2298 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 FAM90A2PQ658T7 463 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 PATE2Q6UY27 113 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 ZNF503Q96F45 646 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 ABCA12Q86UK0 2595 aa9.55□□□□□ -0.88
SDE2-201ENST00000272091 CORTO00230 105 aa9.54□□□□□ -0.88
SDE2-201ENST00000272091 PDZD2O15018 2839 aa9.54□□□□□ -0.88
SDE2-201ENST00000272091 IGLV11-55A0A075B6I3 123 aa9.54□□□□□ -0.88
SDE2-201ENST00000272091 OR5G3P0C626 314 aa9.54□□□□□ -0.88
SDE2-201ENST00000272091 ETFRF1Q6IPR1 90 aa9.54□□□□□ -0.88
SDE2-201ENST00000272091 VAX2Q9UIW0 290 aa9.54□□□□□ -0.88
SDE2-201ENST00000272091 A0A1W2PPV4 95 aa9.54□□□□□ -0.88
SDE2-201ENST00000272091 GATA3P23771 443 aa9.54□□□□□ -0.88
SDE2-201ENST00000272091 SPNS3Q6ZMD2 512 aa9.54□□□□□ -0.88
SDE2-201ENST00000272091 SLC35E3Q7Z769 313 aa9.54□□□□□ -0.88
SDE2-201ENST00000272091 RBM14Q96PK6 669 aaKnown RBP9.54□□□□□ -0.88
SDE2-201ENST00000272091 CLRN3Q8NCR9 226 aa9.53□□□□□ -0.88
SDE2-201ENST00000272091 C1RLQ9NZP8 487 aa9.53□□□□□ -0.88
SDE2-201ENST00000272091 FUT9Q9Y231 359 aa9.53□□□□□ -0.88
SDE2-201ENST00000272091 ZANQ9Y493 2812 aa9.53□□□□□ -0.88
SDE2-201ENST00000272091 RHOBP62745 196 aa9.53□□□□□ -0.88
SDE2-201ENST00000272091 Q96MF0 132 aa9.53□□□□□ -0.88
SDE2-201ENST00000272091 TRGV9Q99603 122 aa9.53□□□□□ -0.88
SDE2-201ENST00000272091 SSX3Q99909 188 aa9.53□□□□□ -0.88
SDE2-201ENST00000272091 MDFIC2A0A1B0GVS7 189 aa9.53□□□□□ -0.88
SDE2-201ENST00000272091 ATP6V0E1O15342 81 aa9.53□□□□□ -0.88
SDE2-201ENST00000272091 PAGE4O60829 102 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms