RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 IFITM10A6NMD0 228 aa16.44■□□□□ 0.22
LYSMD2-201ENST00000267838 MPDU1O75352 247 aa16.44■□□□□ 0.22
LYSMD2-201ENST00000267838 RPL27AP46776 148 aaKnown RBP16.44■□□□□ 0.22
LYSMD2-201ENST00000267838 COMPP49747 757 aaPredicted RBP16.44■□□□□ 0.22
LYSMD2-201ENST00000267838 MMDQ15546 238 aa16.44■□□□□ 0.22
LYSMD2-201ENST00000267838 CLEC12BQ2HXU8 276 aa16.44■□□□□ 0.22
LYSMD2-201ENST00000267838 SPNS3Q6ZMD2 512 aa16.44■□□□□ 0.22
LYSMD2-201ENST00000267838 EAF1Q96JC9 268 aaPredicted RBP16.44■□□□□ 0.22
LYSMD2-201ENST00000267838 NPVFQ9HCQ7 196 aa16.44■□□□□ 0.22
LYSMD2-201ENST00000267838 WNK2Q9Y3S1 2297 aa16.44■□□□□ 0.22
LYSMD2-201ENST00000267838 NBR2O15453 112 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 TRGC1P0CF51 173 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 CD24P25063 80 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 HES1Q14469 280 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 PLGLAQ15195 96 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 FFAR4Q5NUL3 377 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 HIST3H2BBQ8N257 126 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 NPBQ8NG41 125 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 OR2T10Q8NGZ9 312 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 HELZ2Q9BYK8 2649 aaKnown RBP16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 MED13LQ71F56 2210 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 FNDC10F2Z333 226 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 SLC25A16P16260 332 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 KRTAP10-9P60411 292 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 GNB1P62873 340 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 ADIRFQ15847 76 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 LURAP1LQ8IV03 231 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 MRPL41Q8IXM3 137 aaKnown RBP16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 SRD5A3Q9H8P0 318 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 SLC25A22Q9H936 323 aa16.43■□□□□ 0.22
LYSMD2-201ENST00000267838 ABCA2Q9BZC7 2435 aa16.42■□□□□ 0.22
LYSMD2-201ENST00000267838 NDUFA3O95167 84 aa16.42■□□□□ 0.22
LYSMD2-201ENST00000267838 SAA4P35542 130 aa16.42■□□□□ 0.22
LYSMD2-201ENST00000267838 SUB1P53999 127 aaKnown RBP eCLIP16.42■□□□□ 0.22
LYSMD2-201ENST00000267838 ACOT6Q3I5F7 207 aaPredicted RBP16.42■□□□□ 0.22
LYSMD2-201ENST00000267838 FRZBQ92765 325 aa16.42■□□□□ 0.22
LYSMD2-201ENST00000267838 AJUBAQ96IF1 538 aa16.42■□□□□ 0.22
LYSMD2-201ENST00000267838 OR5B12Q96R08 314 aa16.42■□□□□ 0.22
LYSMD2-201ENST00000267838 USP9YO00507 2555 aaPredicted RBP16.42■□□□□ 0.22
LYSMD2-201ENST00000267838 CENPVL3A0A0U1RRI6 287 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 IGLC7A0M8Q6 106 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 FCN1O00602 326 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 FBLN7Q53RD9 439 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 PYY3Q5JQD4 70 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 MGST2Q99735 147 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 PYGO2Q9BRQ0 406 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 LSM4Q9Y4Z0 139 aaKnown RBP16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 TACC2O95359 2948 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 NPFFO15130 113 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 EBI3Q14213 229 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 ANAPC16Q96DE5 110 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 C1orf159Q96HA4 380 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 PITPNC1Q9UKF7 332 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 CRYBG3Q68DQ2 2970 aa16.41■□□□□ 0.22
LYSMD2-201ENST00000267838 H7BYZ3 331 aa16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 MSMBP08118 114 aa16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 RPL23P62829 140 aaKnown RBP16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 SSBP2P81877 361 aaPredicted RBP16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 TEPPQ6URK8 271 aa16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 C16orf82Q7Z2V1 217 aa16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 OR10D4PQ8NGN7 298 aa16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 ABHD5Q8WTS1 349 aa16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 PFDN5Q99471 154 aa16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 PARLQ9H300 379 aa16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 SPG11Q96JI7 2443 aa16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 DOPEY2Q9Y3R5 2298 aa16.4■□□□□ 0.22
LYSMD2-201ENST00000267838 TRAV20A0A0B4J274 112 aa16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 PHOX2AO14813 284 aa16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 REG1AP05451 166 aa16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 OPRK1P41145 380 aa16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 CD69Q07108 199 aa16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 TMEM249Q2WGJ8 235 aa16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 PIP4P2Q8N4L2 257 aa16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 Q8N6K4 173 aa16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 OR4F5Q8NH21 305 aa16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 SRSF12Q8WXF0 261 aaKnown RBP16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 RPUSD4Q96CM3 377 aaKnown RBP16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 OR4F4Q96R69 305 aa16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 GGTLC1Q9BX51 225 aa16.39■□□□□ 0.21
LYSMD2-201ENST00000267838 TEX22C9J3V5 150 aa16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 PFN1P07737 140 aaKnown RBP16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 ZNF114Q8NC26 417 aa16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 RNASEH2CQ8TDP1 164 aaKnown RBP16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 RAB24Q969Q5 203 aa16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 PLXNB1O43157 2135 aa16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 AREGP15514 252 aa16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 GPX4P36969 197 aaPredicted RBP16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 CDC34P49427 236 aaPredicted RBP16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 MLANAQ16655 118 aa16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 C5orf64Q2M2E5 130 aa16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 FAM209BQ5JX69 171 aa16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 CACNG8Q8WXS5 425 aa16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 SSX3Q99909 188 aa16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 GPR61Q9BZJ8 451 aa16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 BEX4Q9NWD9 120 aaPredicted RBP16.38■□□□□ 0.21
LYSMD2-201ENST00000267838 B4DSR2 109 aa16.37■□□□□ 0.21
LYSMD2-201ENST00000267838 GATCO43716 136 aaKnown RBP16.37■□□□□ 0.21
LYSMD2-201ENST00000267838 CNIH1O95406 144 aa16.37■□□□□ 0.21
LYSMD2-201ENST00000267838 TMEM11P17152 192 aa16.37■□□□□ 0.21
LYSMD2-201ENST00000267838 BRS3P32247 399 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms