RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 PPP1R14DQ9NXH3 145 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 RNF24Q9Y225 148 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 YTHDF2Q9Y5A9 579 aaKnown RBP11.3□□□□□ -0.6
NCLN-201ENST00000246117 ZNF134P52741 427 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 TCTEX1D1Q8N7M0 179 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 RNF138Q8WVD3 245 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 LOXL4Q96JB6 756 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 AGMATQ9BSE5 352 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 IFI27L2Q9H2X8 130 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 TBL2Q9Y4P3 447 aaKnown RBP11.3□□□□□ -0.6
NCLN-201ENST00000246117 TMEM131Q92545 1883 aa11.3□□□□□ -0.6
NCLN-201ENST00000246117 DLL1O00548 723 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 SPATA45Q537H7 98 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 TMEM106BQ9NUM4 274 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 ARHGAP32A7KAX9 2087 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 TCF21O43680 179 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 TEX38Q6PEX7 206 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 MAP1AP78559 2803 aaPredicted RBP11.29□□□□□ -0.6
NCLN-201ENST00000246117 C15orf61A6NNL5 157 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 GFRA3O60609 400 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 PMCHL1Q16048 86 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 KLF17Q5JT82 389 aaPredicted RBP11.29□□□□□ -0.6
NCLN-201ENST00000246117 DMRTA1Q5VZB9 504 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 REC114Q7Z4M0 266 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 KLHDC1Q8N7A1 406 aa11.29□□□□□ -0.6
NCLN-201ENST00000246117 DSPP15924 2871 aaKnown RBP11.28□□□□□ -0.6
NCLN-201ENST00000246117 HOXB1P14653 301 aaPredicted RBP11.28□□□□□ -0.6
NCLN-201ENST00000246117 MUC22E2RYF6 1773 aaPredicted RBP11.28□□□□□ -0.6
NCLN-201ENST00000246117 A6NNC1 897 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 YPEL1O60688 119 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 GCGP01275 180 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 WFDC3Q8IUB2 231 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 LINC00469Q8N7U9 141 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 OR5R1Q8NH85 324 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 SRSF12Q8WXF0 261 aaKnown RBP11.28□□□□□ -0.6
NCLN-201ENST00000246117 YPEL2Q96QA6 119 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 MCRIP2Q9BUT9 160 aaKnown RBP11.28□□□□□ -0.6
NCLN-201ENST00000246117 UBTD1Q9HAC8 227 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 MBNL3Q9NUK0 354 aaKnown RBP11.28□□□□□ -0.6
NCLN-201ENST00000246117 PPIAL4CA0A0B4J2A2 164 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 ZNF207O43670 478 aaKnown RBP11.28□□□□□ -0.6
NCLN-201ENST00000246117 PPIAL4GP0DN37 164 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 GZMBP10144 247 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
NCLN-201ENST00000246117 PTTG1IPP53801 180 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 ETFRF1Q6IPR1 90 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 UFC1Q9Y3C8 167 aa11.28□□□□□ -0.6
NCLN-201ENST00000246117 TRBV24-1A0A075B6N3 115 aa11.27□□□□□ -0.6
NCLN-201ENST00000246117 C5orf17Q8NAS9 161 aa11.27□□□□□ -0.6
NCLN-201ENST00000246117 OR8B2Q96RD0 313 aa11.27□□□□□ -0.6
NCLN-201ENST00000246117 SLC25A33Q9BSK2 321 aa11.27□□□□□ -0.6
NCLN-201ENST00000246117 IGHV1-69-2A0A0G2JMI3 117 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 J3QW42 95 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 VENTXO95231 258 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 NBEAP1P0C6P0 100 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 GPX4P36969 197 aaPredicted RBP11.27□□□□□ -0.61
NCLN-201ENST00000246117 HIGD1AQ9Y241 93 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 REV3LO60673 3130 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 TRAV8-1A0A0A6YYK1 113 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 C17orf100A8MU93 164 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 M0QZ24 198 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 RELBQ01201 579 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 KHDC1LQ5JSQ8 128 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 LCN12Q6JVE5 192 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 GP6Q9HCN6 339 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 IL36BQ9NZH7 164 aa11.27□□□□□ -0.61
NCLN-201ENST00000246117 PRR30Q53SZ7 412 aaPredicted RBP11.26□□□□□ -0.61
NCLN-201ENST00000246117 LYPD2Q6UXB3 125 aa11.26□□□□□ -0.61
NCLN-201ENST00000246117 OR8B3Q8NGG8 313 aa11.26□□□□□ -0.61
NCLN-201ENST00000246117 TMEM170AQ8WVE7 144 aa11.26□□□□□ -0.61
NCLN-201ENST00000246117 RAB1CQ92928 201 aa11.26□□□□□ -0.61
NCLN-201ENST00000246117 SLC25A15Q9Y619 301 aa11.26□□□□□ -0.61
NCLN-201ENST00000246117 IL4P05112 153 aa11.26□□□□□ -0.61
NCLN-201ENST00000246117 RBM14Q96PK6 669 aaKnown RBP11.26□□□□□ -0.61
NCLN-201ENST00000246117 K7EM74 188 aa11.26□□□□□ -0.61
NCLN-201ENST00000246117 MAS1LP35410 378 aa11.26□□□□□ -0.61
NCLN-201ENST00000246117 TRAV1-1A0A0B4J248 108 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 TEX50A0A1B0GTY4 177 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 UPK2O00526 184 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 AMY1AP04745 511 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 CHRDL1Q9BU40 450 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 STAG3L2P0CL84 134 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 STAG3L3P0CL85 134 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 DIAPH2-AS1Q14236 149 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 ZNF664Q8N3J9 261 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 HIVEP3Q5T1R4 2406 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 HIGD1CA8MV81 97 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 IGKV3-15P01624 115 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 IGHV2-5P01817 119 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 JOSD1Q15040 202 aaPredicted RBP11.25□□□□□ -0.61
NCLN-201ENST00000246117 TMEM144Q7Z5S9 345 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 ZNF596Q8TC21 504 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 VPS25Q9BRG1 176 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 FOXA2Q9Y261 457 aaPredicted RBP11.25□□□□□ -0.61
NCLN-201ENST00000246117 S100A4P26447 101 aaKnown RBP11.25□□□□□ -0.61
NCLN-201ENST00000246117 UQCRFS1P47985 274 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 UTF1Q5T230 341 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 SMIM15Q7Z3B0 74 aa11.25□□□□□ -0.61
NCLN-201ENST00000246117 Q6ZS49 121 aa11.24□□□□□ -0.61
NCLN-201ENST00000246117 OR4C5Q8NGB2 326 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms