RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 GPR183P32249 361 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 ARL3P36405 182 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 B3GALT5-AS1P59052 145 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 RNPS1Q15287 305 aaKnown RBP12□□□□□ -0.49
PRDM4-201ENST00000228437 WDR86Q86TI4 376 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 COQ2Q96H96 371 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 TNFRSF19Q9NS68 423 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 TRAV9-1A0A075B6T8 112 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 FAM87AP0C7U9 286 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 SFXN3Q9BWM7 321 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 TWSG1Q9GZX9 223 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12□□□□□ -0.49
PRDM4-201ENST00000228437 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12□□□□□ -0.49
PRDM4-201ENST00000228437 RBP4P02753 201 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 CT45A6P0DMU7 189 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 CT45A5P0DMU8 189 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 CT45A7P0DMV0 189 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 SRSF7Q16629 238 aaKnown RBP eCLIP12□□□□□ -0.49
PRDM4-201ENST00000228437 CT45A1Q5HYN5 189 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 CT45A3Q8NHU0 189 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 TMEM131Q92545 1883 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 CCL11P51671 97 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 LINC00310P59036 64 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 HBBP68871 147 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 VWC2Q2TAL6 325 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 SPACA3Q8IXA5 215 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 C18orf15Q96N68 181 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 HSPB8Q9UJY1 196 aa12□□□□□ -0.49
PRDM4-201ENST00000228437 COLQQ9Y215 455 aaPredicted RBP12□□□□□ -0.49
PRDM4-201ENST00000228437 PAX1P15863 534 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 CDKN1BP46527 198 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 ACP7Q6ZNF0 438 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 MRPL52Q86TS9 123 aaKnown RBP11.99□□□□□ -0.49
PRDM4-201ENST00000228437 ZNRD1Q9P1U0 126 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 MRPS16Q9Y3D3 137 aaKnown RBP11.99□□□□□ -0.49
PRDM4-201ENST00000228437 PEX7O00628 323 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 CSN1S1P47710 185 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 SMAGPQ0VAQ4 97 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 SPEM1Q8N4L4 309 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 A6NDN8 102 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 GGTLC3B5MD39 225 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 PPP1R32Q7Z5V6 425 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 SRSF12Q8WXF0 261 aaKnown RBP11.99□□□□□ -0.49
PRDM4-201ENST00000228437 RAB1CQ92928 201 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 CALYQ9NYX4 217 aa11.99□□□□□ -0.49
PRDM4-201ENST00000228437 CHD9Q3L8U1 2897 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 APOHP02749 345 aaPredicted RBP11.98□□□□□ -0.49
PRDM4-201ENST00000228437 PRB3Q04118 309 aaPredicted RBP11.98□□□□□ -0.49
PRDM4-201ENST00000228437 SMIM12Q96EX1 92 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 AHRRA9YTQ3 701 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 C9JCJ5 164 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 IGLV3-19P01714 112 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 CT45A10P0DMU9 189 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 SUB1P53999 127 aaKnown RBP eCLIP11.98□□□□□ -0.49
PRDM4-201ENST00000228437 DAZAP2Q15038 168 aaPredicted RBP11.98□□□□□ -0.49
PRDM4-201ENST00000228437 C1orf185Q5T7R7 199 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 CCL13Q99616 98 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 PMS2P5A8MQ11 134 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 PRSS1P07477 247 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 C10orf55Q5SWW7 151 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 COLCA1Q6ZS62 124 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 DYSFO75923 2080 aa11.98□□□□□ -0.49
PRDM4-201ENST00000228437 IGHV2-26A0A0B4J1V2 119 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 CENPVQ7Z7K6 275 aaPredicted RBP11.97□□□□□ -0.49
PRDM4-201ENST00000228437 PRNDQ9UKY0 176 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 LAMTOR5O43504 91 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 LINC00305Q7Z4B0 112 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 PNKDQ8N490 385 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 GRAMD2BQ96HH9 432 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 ADTRPQ96IZ2 230 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 AP5S1Q9NUS5 200 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 ZFHX2Q9C0A1 2572 aaPredicted RBP11.97□□□□□ -0.49
PRDM4-201ENST00000228437 ZGRF1Q86YA3 2104 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 TRAV8-1A0A0A6YYK1 113 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 C5orf30Q96GV9 206 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 MED13Q9UHV7 2174 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 AREGP15514 252 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 GTSF1LQ9H1H1 148 aa11.97□□□□□ -0.49
PRDM4-201ENST00000228437 SYS1-DBNDD2H3BUS1 97 aa11.96□□□□□ -0.49
PRDM4-201ENST00000228437 MORN2Q502X0 79 aa11.96□□□□□ -0.49
PRDM4-201ENST00000228437 SPCS1Q9Y6A9 102 aa11.96□□□□□ -0.49
PRDM4-201ENST00000228437 IGLC7A0M8Q6 106 aa11.96□□□□□ -0.49
PRDM4-201ENST00000228437 ATP1A1-AS1Q5TC04 95 aa11.96□□□□□ -0.49
PRDM4-201ENST00000228437 GOLT1AQ6ZVE7 132 aa11.96□□□□□ -0.49
PRDM4-201ENST00000228437 TMUB1Q9BVT8 246 aa11.96□□□□□ -0.49
PRDM4-201ENST00000228437 TRBV6-6A0A0A6YYG2 114 aa11.96□□□□□ -0.5
PRDM4-201ENST00000228437 IGHV2-70DA0A0C4DH43 119 aa11.96□□□□□ -0.5
PRDM4-201ENST00000228437 GUCD1Q96NT3 240 aa11.96□□□□□ -0.5
PRDM4-201ENST00000228437 KLF13Q9Y2Y9 288 aaPredicted RBP11.96□□□□□ -0.5
PRDM4-201ENST00000228437 LOC105371242A0A075B767 164 aa11.95□□□□□ -0.5
PRDM4-201ENST00000228437 FAM231BA6NCW3 169 aa11.95□□□□□ -0.5
PRDM4-201ENST00000228437 YPEL1O60688 119 aa11.95□□□□□ -0.5
PRDM4-201ENST00000228437 Q0VFX4 171 aa11.95□□□□□ -0.5
PRDM4-201ENST00000228437 TMEM108Q6UXF1 575 aa11.95□□□□□ -0.5
PRDM4-201ENST00000228437 YPEL2Q96QA6 119 aa11.95□□□□□ -0.5
PRDM4-201ENST00000228437 RAB9BQ9NP90 201 aa11.95□□□□□ -0.5
PRDM4-201ENST00000228437 LIPFP07098 398 aa11.95□□□□□ -0.5
PRDM4-201ENST00000228437 SSPNQ14714 243 aa11.95□□□□□ -0.5
PRDM4-201ENST00000228437 TEX45Q8NA69 505 aa11.95□□□□□ -0.5
PRDM4-201ENST00000228437 MAFAQ8NHW3 353 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms