RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 CA2P00918 260 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 IFNA1P01562 189 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 COMPP49747 757 aaPredicted RBP14.31□□□□□ -0.12
CBX1-201ENST00000225603 PMS2P11Q13670 270 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 RNF212Q495C1 297 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 ZNF709Q8N972 641 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 SMR3AQ99954 134 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 PLEKHA3Q9HB20 300 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 H3BUX3 64 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 IFNA10P01566 189 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 RAB11AP62491 216 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 LY6EQ16553 131 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 FAM90A2PQ658T7 463 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 ZFP82Q8N141 532 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 OR10G9Q8NGN4 311 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 OR10G7Q8NGN6 311 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 TVP23CQ96ET8 276 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 SLC25A22Q9H936 323 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 VAX2Q9UIW0 290 aa14.31□□□□□ -0.12
CBX1-201ENST00000225603 CTXND1A0A1B0GTU2 59 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 C17orf112F2Z3M2 114 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 ACTL6BO94805 426 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 APELAP0DMC3 54 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 DLK1P80370 383 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 SLC35E3Q7Z769 313 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 P2RX4Q99571 388 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 WDR83OSQ9Y284 106 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 OR2C1O95371 312 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 MAS1LP35410 378 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 TAGLN2P37802 199 aaKnown RBP14.3□□□□□ -0.12
CBX1-201ENST00000225603 RPL27AP46776 148 aaKnown RBP14.3□□□□□ -0.12
CBX1-201ENST00000225603 WT1-ASQ06250 92 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 C9orf139Q6ZV77 190 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 FAM24BQ8N5W8 94 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 ZNF48Q96MX3 618 aaPredicted RBP14.3□□□□□ -0.12
CBX1-201ENST00000225603 ENY2Q9NPA8 101 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 YAE1D1Q9NRH1 226 aa14.3□□□□□ -0.12
CBX1-201ENST00000225603 A0A087WWC5 75 aa14.29□□□□□ -0.12
CBX1-201ENST00000225603 SH2D7A6NKC9 451 aaPredicted RBP14.29□□□□□ -0.12
CBX1-201ENST00000225603 RAB5BP61020 215 aa14.29□□□□□ -0.12
CBX1-201ENST00000225603 C2CD4CQ8TF44 421 aa14.29□□□□□ -0.12
CBX1-201ENST00000225603 YPEL4Q96NS1 127 aa14.29□□□□□ -0.12
CBX1-201ENST00000225603 RBM14Q96PK6 669 aaKnown RBP14.29□□□□□ -0.12
CBX1-201ENST00000225603 ACTR3CQ9C0K3 210 aaPredicted RBP14.29□□□□□ -0.12
CBX1-201ENST00000225603 BIN3Q9NQY0 253 aa14.29□□□□□ -0.12
CBX1-201ENST00000225603 MXRA5Q9NR99 2828 aa14.29□□□□□ -0.12
CBX1-201ENST00000225603 RAB5AP20339 215 aa14.29□□□□□ -0.12
CBX1-201ENST00000225603 RBMS3Q6XE24 437 aaKnown RBP14.29□□□□□ -0.12
CBX1-201ENST00000225603 SRSF12Q8WXF0 261 aaKnown RBP14.29□□□□□ -0.12
CBX1-201ENST00000225603 SLC25A33Q9BSK2 321 aa14.29□□□□□ -0.12
CBX1-201ENST00000225603 C1RLQ9NZP8 487 aa14.29□□□□□ -0.12
CBX1-201ENST00000225603 NAV3Q8IVL0 2385 aa14.28□□□□□ -0.12
CBX1-201ENST00000225603 IGLC7A0M8Q6 106 aa14.28□□□□□ -0.12
CBX1-201ENST00000225603 A6NDX4 124 aa14.28□□□□□ -0.12
CBX1-201ENST00000225603 C1orf196B1AJZ1 125 aa14.28□□□□□ -0.12
CBX1-201ENST00000225603 TEX22C9J3V5 150 aa14.28□□□□□ -0.12
CBX1-201ENST00000225603 HMGB3O15347 200 aaKnown RBP14.28□□□□□ -0.12
CBX1-201ENST00000225603 CNIH1O95406 144 aa14.28□□□□□ -0.12
CBX1-201ENST00000225603 IGHV4-59P01825 116 aa14.28□□□□□ -0.12
CBX1-201ENST00000225603 CX3CL1P78423 397 aa14.28□□□□□ -0.12
CBX1-201ENST00000225603 NDPQ00604 133 aa14.28□□□□□ -0.12
CBX1-201ENST00000225603 FXYD3Q14802 87 aa14.28□□□□□ -0.12
CBX1-201ENST00000225603 FAM103A1Q9BTL3 118 aaKnown RBP14.28□□□□□ -0.12
CBX1-201ENST00000225603 GGACTQ9BVM4 153 aa14.28□□□□□ -0.12
CBX1-201ENST00000225603 PRSS46E5RG02 174 aa14.27□□□□□ -0.12
CBX1-201ENST00000225603 AMY1AP04745 511 aa14.27□□□□□ -0.12
CBX1-201ENST00000225603 REG1AP05451 166 aa14.27□□□□□ -0.12
CBX1-201ENST00000225603 AREGP15514 252 aa14.27□□□□□ -0.12
CBX1-201ENST00000225603 SLC24A4Q8NFF2 622 aa14.27□□□□□ -0.12
CBX1-201ENST00000225603 PRELID1Q9Y255 219 aa14.27□□□□□ -0.12
CBX1-201ENST00000225603 ZNF727A8MUV8 499 aa14.27□□□□□ -0.13
CBX1-201ENST00000225603 SPNS3Q6ZMD2 512 aa14.27□□□□□ -0.13
CBX1-201ENST00000225603 C19orf35Q6ZS72 473 aa14.27□□□□□ -0.13
CBX1-201ENST00000225603 C5orf56Q8N8D9 126 aa14.27□□□□□ -0.13
CBX1-201ENST00000225603 RAB24Q969Q5 203 aa14.27□□□□□ -0.13
CBX1-201ENST00000225603 HSPB9Q9BQS6 159 aa14.27□□□□□ -0.13
CBX1-201ENST00000225603 IGHV7-81A0A0B4J1V7 117 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 SMCO3A2RU48 225 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 INS-IGF2F8WCM5 200 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 BSXQ3C1V8 233 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 ACOT6Q3I5F7 207 aaPredicted RBP14.26□□□□□ -0.13
CBX1-201ENST00000225603 ZNF562Q6V9R5 426 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 TMPRSS5Q9H3S3 457 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 A0A1W2PN81 502 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 MPDU1O75352 247 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 RNASE2P10153 161 aaKnown RBP14.26□□□□□ -0.13
CBX1-201ENST00000225603 NPY1RP25929 384 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 CHRNA7P36544 502 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 IER3P46695 156 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 CD81P60033 236 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 SSMEM1Q8WWF3 244 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 RASL11BQ9BPW5 248 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 MOB4Q9Y3A3 225 aa14.26□□□□□ -0.13
CBX1-201ENST00000225603 CYB5BO43169 146 aa14.25□□□□□ -0.13
CBX1-201ENST00000225603 ERHP84090 104 aaKnown RBP14.25□□□□□ -0.13
CBX1-201ENST00000225603 MEF2BQ02080 365 aaPredicted RBP14.25□□□□□ -0.13
CBX1-201ENST00000225603 TREML4Q6UXN2 200 aa14.25□□□□□ -0.13
CBX1-201ENST00000225603 TNFRSF19Q9NS68 423 aa14.25□□□□□ -0.13
CBX1-201ENST00000225603 LINC01548A6NM66 108 aa14.25□□□□□ -0.13
CBX1-201ENST00000225603 B4DEV8 164 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms