RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 A0A0G2JNJ9 132 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 KLRD1Q13241 179 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 ACTL10Q5JWF8 245 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 Q9UFV3 132 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 IGKV1D-43A0A0B4J1Z2 117 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 TFF3Q07654 80 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 SPSB3Q6PJ21 355 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 Q71RC1 249 aaPredicted RBP8.78□□□□□ -1
TRPS1-201ENST00000220888 MIR17HGQ75NE6 70 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 HAPLN4Q86UW8 402 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 FAM110DQ8TAY7 271 aaPredicted RBP8.78□□□□□ -1
TRPS1-201ENST00000220888 C11orf68Q9H3H3 251 aaKnown RBP8.78□□□□□ -1
TRPS1-201ENST00000220888 CYSLTR1Q9Y271 337 aa8.78□□□□□ -1
TRPS1-201ENST00000220888 PINLYPA6NC86 204 aa8.77□□□□□ -1
TRPS1-201ENST00000220888 NDUFA3O95167 84 aa8.77□□□□□ -1
TRPS1-201ENST00000220888 SMIM6P0DI80 62 aa8.77□□□□□ -1
TRPS1-201ENST00000220888 GATA4P43694 442 aa8.77□□□□□ -1
TRPS1-201ENST00000220888 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1
TRPS1-201ENST00000220888 SELENOKQ9Y6D0 94 aa8.77□□□□□ -1
TRPS1-201ENST00000220888 CGB3P0DN86 165 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 TPTE2P1Q5T6R2 138 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 PPP1R3EQ9H7J1 279 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 IGHV3-53P01767 116 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 GATA3P23771 443 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 UCP1P25874 307 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 ACACAQ13085 2346 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 TGFBR3LH3BV60 316 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 INSP01308 110 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 M0R1W7 72 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 CGB7P0DN87 165 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 NAT1P18440 290 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 MCRIP2Q9BUT9 160 aaKnown RBP8.77□□□□□ -1.01
TRPS1-201ENST00000220888 BPESC1Q9GZL8 116 aa8.77□□□□□ -1.01
TRPS1-201ENST00000220888 VENTXO95231 258 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 SOD3P08294 240 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 GFI1BQ5VTD9 330 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 ZNF329Q86UD4 541 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 UBE2E2Q96LR5 201 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 ZNF660Q6AZW8 331 aaPredicted RBP8.76□□□□□ -1.01
TRPS1-201ENST00000220888 USMG5Q96IX5 58 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 SDHCQ99643 169 aaPredicted RBP8.76□□□□□ -1.01
TRPS1-201ENST00000220888 CXorf65A6NEN9 183 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 TMEM178BH3BS89 294 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 APOMO95445 188 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 ZMAT4Q9H898 229 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 IGHV1-8P0DP01 117 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 DEFB130BP0DP73 79 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 DEFB130AP0DP74 79 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 CXCL2P19875 107 aa8.76□□□□□ -1.01
TRPS1-201ENST00000220888 RCC1LQ96I51 464 aaKnown RBP8.76□□□□□ -1.01
TRPS1-201ENST00000220888 TNFSF13O75888 250 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 DANCRP0C864 163 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 MORN3Q6PF18 240 aaPredicted RBP8.75□□□□□ -1.01
TRPS1-201ENST00000220888 THSD7AQ9UPZ6 1657 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 MSMBP08118 114 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 SRSF1Q07955 248 aaKnown RBP eCLIP8.75□□□□□ -1.01
TRPS1-201ENST00000220888 ZNF525Q8N782 197 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 TCF21O43680 179 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 ATOH7Q8N100 152 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 OR5A1Q8NGJ0 315 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 K7ENP7 123 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 TFF1P04155 84 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 CBLN1P23435 193 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 ABCA7Q8IZY2 2146 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 PSG8Q9UQ74 426 aa8.75□□□□□ -1.01
TRPS1-201ENST00000220888 TRBV7-1A0A0A6YYK4 115 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 TRAV12-3A0A0B4J271 114 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 SCO2A0A1W2PP80 73 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 LINC00587B1AMM8 73 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 Q6ZS92 163 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 TRBV6-7A0A0A0MS04 114 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 LINC00271P0C7V0 271 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 PLNP26678 52 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 Q0VFX4 171 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 LCN12Q6JVE5 192 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 IL36BQ9NZH7 164 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 MARF1Q9Y4F3 1742 aaKnown RBP8.74□□□□□ -1.01
TRPS1-201ENST00000220888 A0A0U1RRA0 63 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 PPIFP30405 207 aaKnown RBP8.74□□□□□ -1.01
TRPS1-201ENST00000220888 ORMDL2Q53FV1 153 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 ZNF497Q6ZNH5 498 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 RNF5Q99942 180 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 MBNL3Q9NUK0 354 aaKnown RBP8.74□□□□□ -1.01
TRPS1-201ENST00000220888 RPUSD1Q9UJJ7 312 aaKnown RBP8.74□□□□□ -1.01
TRPS1-201ENST00000220888 IGLV3-32A0A0A0MS00 114 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 IGHV1-3A0A0C4DH29 117 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 MLNRO43193 412 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 FXYD7P58549 80 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 GNG5P63218 68 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 PAX2Q02962 417 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 TRAF4Q9BUZ4 470 aaPredicted RBP8.74□□□□□ -1.01
TRPS1-201ENST00000220888 GGTLC3B5MD39 225 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 TMEM95Q3KNT9 176 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 TMEM200BQ69YZ2 307 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 HEPN1Q6WQI6 88 aa8.74□□□□□ -1.01
TRPS1-201ENST00000220888 POLR2AP24928 1970 aaKnown RBP8.73□□□□□ -1.01
TRPS1-201ENST00000220888 COL6A6A6NMZ7 2263 aa8.73□□□□□ -1.01
TRPS1-201ENST00000220888 SLC17A3O00476 420 aa8.73□□□□□ -1.01
TRPS1-201ENST00000220888 NAPSAO96009 420 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms