RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 MFAP2P55001 183 aa13.86□□□□□ -0.19
VRK1-201ENST00000216639 DSCR9P59020 149 aa13.86□□□□□ -0.19
VRK1-201ENST00000216639 BPIFB3P59826 476 aa13.86□□□□□ -0.19
VRK1-201ENST00000216639 ZNF674Q2M3X9 581 aa13.86□□□□□ -0.19
VRK1-201ENST00000216639 SPATA31B1PQ5VZV4 182 aa13.86□□□□□ -0.19
VRK1-201ENST00000216639 MIR17HGQ75NE6 70 aa13.86□□□□□ -0.19
VRK1-201ENST00000216639 Q8N6K4 173 aa13.86□□□□□ -0.19
VRK1-201ENST00000216639 SDF2L1Q9HCN8 221 aa13.86□□□□□ -0.19
VRK1-201ENST00000216639 IGHV4-61A0A0C4DH41 118 aa13.85□□□□□ -0.19
VRK1-201ENST00000216639 TMEM241Q24JQ0 296 aa13.85□□□□□ -0.19
VRK1-201ENST00000216639 PQLC2Q6ZP29 291 aa13.85□□□□□ -0.19
VRK1-201ENST00000216639 TMEM116Q8NCL8 245 aa13.85□□□□□ -0.19
VRK1-201ENST00000216639 C17orf50Q8WW18 174 aa13.85□□□□□ -0.19
VRK1-201ENST00000216639 RPUSD4Q96CM3 377 aaKnown RBP13.85□□□□□ -0.19
VRK1-201ENST00000216639 DNAJC4Q9NNZ3 241 aa13.85□□□□□ -0.19
VRK1-201ENST00000216639 TMEM167BQ9NRX6 74 aa13.85□□□□□ -0.19
VRK1-201ENST00000216639 PRELID1Q9Y255 219 aa13.85□□□□□ -0.19
VRK1-201ENST00000216639 IGKV1D-37A0A075B6S9 117 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 COLCA2A8K830 154 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 NPFFO15130 113 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 COX7A2P2O60397 106 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 OR2C1O95371 312 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 IGHV3-48P01763 117 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 SAA4P35542 130 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 PAX8Q06710 450 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 ZNF562Q6V9R5 426 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 TRGV9Q99603 122 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 WNT10AQ9GZT5 417 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 PARLQ9H300 379 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 TNFRSF19Q9NS68 423 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 ARL2-SNX15V9GYD0 113 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 C8orf88P0DMB2 117 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 C10orf113Q5VZT2 155 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 PERPQ96FX8 193 aa13.84□□□□□ -0.19
VRK1-201ENST00000216639 IGSF10Q6WRI0 2623 aa13.83□□□□□ -0.2
VRK1-201ENST00000216639 MT-ND4LP03901 98 aa13.83□□□□□ -0.2
VRK1-201ENST00000216639 PAX1P15863 534 aa13.83□□□□□ -0.2
VRK1-201ENST00000216639 CTRB1P17538 263 aa13.83□□□□□ -0.2
VRK1-201ENST00000216639 ATP5G3P48201 142 aa13.83□□□□□ -0.2
VRK1-201ENST00000216639 CTRB2Q6GPI1 263 aa13.83□□□□□ -0.2
VRK1-201ENST00000216639 OR4X1Q8NH49 305 aa13.83□□□□□ -0.2
VRK1-201ENST00000216639 ARPC1AQ92747 370 aa13.83□□□□□ -0.2
VRK1-201ENST00000216639 MRPL36Q9P0J6 103 aaKnown RBP13.83□□□□□ -0.2
VRK1-201ENST00000216639 ELOA3CA0A087WX78 387 aaPredicted RBP13.82□□□□□ -0.2
VRK1-201ENST00000216639 CXorf65A6NEN9 183 aa13.82□□□□□ -0.2
VRK1-201ENST00000216639 OR7C2O60412 319 aa13.82□□□□□ -0.2
VRK1-201ENST00000216639 ZNF90Q03938 601 aa13.82□□□□□ -0.2
VRK1-201ENST00000216639 C19orf35Q6ZS72 473 aa13.82□□□□□ -0.2
VRK1-201ENST00000216639 TMEM37Q8WXS4 190 aa13.82□□□□□ -0.2
VRK1-201ENST00000216639 ISOC2Q96AB3 205 aa13.82□□□□□ -0.2
VRK1-201ENST00000216639 IGHV4-30-2A0A087WSY4 118 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 CENPVL3A0A0U1RRI6 287 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 PSMB11A5LHX3 300 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 CX3CL1P78423 397 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 UHRF2Q96PU4 802 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 DCHS2Q6V1P9 2916 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 I3L2K1 104 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 ADIRFQ15847 76 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 AJUBAQ96IF1 538 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 TMEM242Q9NWH2 141 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 MLXQ9UH92 298 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 DMRT1Q9Y5R6 373 aa13.81□□□□□ -0.2
VRK1-201ENST00000216639 LOC105371267A0A1B0GV96 52 aa13.8□□□□□ -0.2
VRK1-201ENST00000216639 NPIPB5A8MRT5 1133 aa13.8□□□□□ -0.2
VRK1-201ENST00000216639 FABP1P07148 127 aa13.8□□□□□ -0.2
VRK1-201ENST00000216639 SRSF1Q07955 248 aaKnown RBP eCLIP13.8□□□□□ -0.2
VRK1-201ENST00000216639 KIAA0141Q14154 515 aaPredicted RBP13.8□□□□□ -0.2
VRK1-201ENST00000216639 RNF212Q495C1 297 aa13.8□□□□□ -0.2
VRK1-201ENST00000216639 FBLN7Q53RD9 439 aa13.8□□□□□ -0.2
VRK1-201ENST00000216639 HIST1H2BAQ96A08 127 aa13.8□□□□□ -0.2
VRK1-201ENST00000216639 RASL11BQ9BPW5 248 aa13.8□□□□□ -0.2
VRK1-201ENST00000216639 FAM103A1Q9BTL3 118 aaKnown RBP13.8□□□□□ -0.2
VRK1-201ENST00000216639 CTDSP1Q9GZU7 261 aa13.8□□□□□ -0.2
VRK1-201ENST00000216639 DOK5Q9P104 306 aa13.8□□□□□ -0.2
VRK1-201ENST00000216639 USP24Q9UPU5 2620 aa13.79□□□□□ -0.2
VRK1-201ENST00000216639 IGHV3-21A0A0B4J1V1 117 aa13.79□□□□□ -0.2
VRK1-201ENST00000216639 PIP4P2Q8N4L2 257 aa13.79□□□□□ -0.2
VRK1-201ENST00000216639 FAM24BQ8N5W8 94 aa13.79□□□□□ -0.2
VRK1-201ENST00000216639 YTHDF2Q9Y5A9 579 aaKnown RBP13.79□□□□□ -0.2
VRK1-201ENST00000216639 IGHV1-69DA0A0B4J2H0 117 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 A1L4Q6 167 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 NDUFB4O95168 129 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 IGHV1-69P01742 117 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 FOLR2P14207 255 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 SLC25A16P16260 332 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 FAM120AOSQ5T036 256 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 TTC9CQ8N5M4 171 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 Q8N9W7 124 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 OR51G1Q8NGK1 321 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 CLDN34H7C241 214 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 HLA-DRB1P01911 266 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 CRYBA1P05813 215 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 MSMBP08118 114 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 NPPCP23582 126 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 RPL23P62829 140 aaKnown RBP13.78□□□□□ -0.2
VRK1-201ENST00000216639 FLI1Q01543 452 aaPredicted RBP13.78□□□□□ -0.2
VRK1-201ENST00000216639 STXBP6Q8NFX7 210 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 OR5AU1Q8NGC0 362 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 SLC25A2Q9BXI2 301 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 ZNF355PQ9NSJ1 428 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms