RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CARHSP1Q9Y2V2 147 aaKnown RBP11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 GREB1LQ9C091 1923 aaPredicted RBP11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 CACNA1DQ01668 2161 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 UCP1P25874 307 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 VKORC1Q9BQB6 163 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 NHP2Q9NX24 153 aaKnown RBP11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 DPM3Q9P2X0 92 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 LYPD3O95274 346 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 TNFSF10P50591 281 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 GP6Q9HCN6 339 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 PGPEP1Q9NXJ5 209 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 GPX4P36969 197 aaPredicted RBP11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 MORN2Q502X0 79 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 SPCS1Q9Y6A9 102 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 EXOC3-AS1Q8N2X6 119 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 FAM168AQ92567 244 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 FMC1Q96HJ9 113 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 IGKV1-12A0A0C4DH73 117 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 IGKV1D-12P01611 117 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 NDPQ00604 133 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 ASPHD1Q5U4P2 390 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 TRGV2A0A075B6R0 118 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 IGHV1-18A0A0C4DH31 117 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 IZUMO1RA6ND01 250 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 TDGF1P13385 188 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 LCNL1Q6ZST4 164 aa11.33□□□□□ -0.6
TGFBR3-201ENST00000212355 TRAV2A0A0B4J234 112 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 LY6HO94772 140 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 TRBV9A0A0B4J1U6 114 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 OR10J3Q5JRS4 329 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 FLVCR1-AS1Q8TAF5 88 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 FREM3P0C091 2139 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 ZNF497Q6ZNH5 498 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 C10orf126Q8N4M7 172 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 ZNRD1Q9P1U0 126 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 NPIPB13A6NJU9 1138 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 NPIPB5A8MRT5 1133 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 EFNA2O43921 213 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 TMEM101Q96IK0 257 aa11.32□□□□□ -0.6
TGFBR3-201ENST00000212355 CFHR1Q03591 330 aa11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 KLF17Q5JT82 389 aaPredicted RBP11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 COQ2Q96H96 371 aa11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 PEF1Q9UBV8 284 aaKnown RBP11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 TSPOP30536 169 aa11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 UCNP55089 124 aa11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 NPFFR1Q9GZQ6 430 aa11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 RPUSD1Q9UJJ7 312 aaKnown RBP11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 A0A0G2JMZ2 1700 aa11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 LRRC37A2A6NM11 1700 aa11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 C17orf100A8MU93 164 aa11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 C1orf122Q6ZSJ8 110 aa11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 IQCF6A8MYZ5 107 aa11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 ZNF585BQ52M93 769 aa11.31□□□□□ -0.6
TGFBR3-201ENST00000212355 HOXA5P20719 270 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 ALKBH7Q9BT30 221 aaPredicted RBP11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 YAE1D1Q9NRH1 226 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 ELOVL5Q9NYP7 299 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 SCN10AQ9Y5Y9 1956 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 HIST1H2BKO60814 126 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 HIST1H2BJP06899 126 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 HIST1H2BOP23527 126 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 HIST1H2BBP33778 126 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 HIST1H2BDP58876 126 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 HIST1H2BCP62807 126 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 HIST2H2BEQ16778 126 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 HIST1H2BHQ93079 126 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 HIST1H2BNQ99877 126 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 HIST1H2BMQ99879 126 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 DOCK6Q96HP0 2047 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 TRBV7-9A0A0J9YWB2 115 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 TIMP3P35625 211 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 IMMP1LQ96LU5 166 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 TRBV6-7A0A0A0MS04 114 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 TIMM23O14925 209 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 MST1P26927 711 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 SRSF4Q08170 494 aaKnown RBP11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 LRTM2Q8N967 370 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 RALGAPA2Q2PPJ7 1873 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 EFNB3Q15768 340 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 NIT1Q86X76 327 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 OR5A1Q8NGJ0 315 aa11.3□□□□□ -0.6
TGFBR3-201ENST00000212355 UPK2O00526 184 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 TMEM250H0YL14 139 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 OSR1Q8TAX0 266 aaPredicted RBP11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 FAM57AQ8TBR7 257 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 GDF15Q99988 308 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 VENTXO95231 258 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 IGHV3-53P01767 116 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 CIARTQ8N365 385 aaPredicted RBP11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 CHRNA10Q9GZZ6 450 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 ZNF138P52744 262 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 RHOGP84095 191 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 PHF3Q92576 2039 aaKnown RBP11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 SCN4AP35499 1836 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 TRAV40A0A0B4J280 105 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 C15orf61A6NNL5 157 aa11.29□□□□□ -0.6
TGFBR3-201ENST00000212355 J3QRE1 110 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms