RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 UNQ5815/PRO19632Q6UWF5 114 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 C18orf12Q96KH6 178 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 UPK2O00526 184 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 LOXL3P58215 753 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 GAGE13Q4V321 117 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 CENPWQ5EE01 88 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 PTPRFP10586 1907 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 IGHV2OR16-5A0A0B4J2B6 119 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 ZNF137PP52743 207 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 SRRM5B3KS81 715 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 TMEM238C9JI98 176 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 PLNP26678 52 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 VWCEQ96DN2 955 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 WBP1Q96G27 269 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 PGPA6NDG6 321 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 TBX6O95947 436 aaPredicted RBP4.86□□□□□ -1.63
CBX5-201ENST00000209875 OR11H4Q8NGC9 324 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 DDB2Q92466 427 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 SLC25A28Q96A46 364 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 PEMTQ9UBM1 199 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 HBDP02042 147 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 LHX2P50458 406 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 PDCD1Q15116 288 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 DTX1Q86Y01 620 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 ZNF488Q96MN9 340 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 FSCN3Q9NQT6 498 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 A8MWV9 139 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 SRP19P09132 144 aaKnown RBP4.86□□□□□ -1.63
CBX5-201ENST00000209875 HEPN1Q6WQI6 88 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 RCC1LQ96I51 464 aaKnown RBP4.86□□□□□ -1.63
CBX5-201ENST00000209875 SPAARA0A1B0GVQ0 90 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 MED19A0JLT2 244 aaPredicted RBP4.86□□□□□ -1.63
CBX5-201ENST00000209875 GAGE1Q13065 139 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 C1orf194Q5T5A4 169 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 FAM231BA6NCW3 169 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 DLEU1O43261 78 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 TNFSF13O75888 250 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 ZNF497Q6ZNH5 498 aa4.86□□□□□ -1.63
CBX5-201ENST00000209875 RPP21Q9H633 154 aaKnown RBP4.86□□□□□ -1.63
CBX5-201ENST00000209875 MRPL27Q9P0M9 148 aaKnown RBP4.86□□□□□ -1.63
CBX5-201ENST00000209875 SBF1O95248 1867 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 TRBV20OR9-2A0A075B6H5 130 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 TRAV8-4A0A0B4J246 113 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 AGFG2O95081 481 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 LTBRP36941 435 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 SNAI3Q3KNW1 292 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 FN1P02751 2386 aaKnown RBP4.85□□□□□ -1.63
CBX5-201ENST00000209875 LOC389332A0A1B0GUA5 103 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 GAGE2BQ13066 116 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 GAGE2EQ4V326 116 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 TMEM101Q96IK0 257 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 GAGE2DQ9UEU5 116 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 TRAV8-2A0A0B4J237 113 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 IL6RP08887 468 aaPredicted RBP4.85□□□□□ -1.63
CBX5-201ENST00000209875 CXorf66Q5JRM2 361 aaPredicted RBP4.85□□□□□ -1.63
CBX5-201ENST00000209875 SPSB3Q6PJ21 355 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 ZNF525Q8N782 197 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 A0A1W2PRS3 328 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 ESDP10768 282 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 LYL1P12980 280 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 MYF5P13349 255 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 LY6G6FQ5SQ64 297 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 SLC25A48Q6ZT89 311 aaKnown RBP4.85□□□□□ -1.63
CBX5-201ENST00000209875 RFLNBQ8N5W9 214 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 PRSS2P07478 247 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 CECR9P0C854 216 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 GATA3P23771 443 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 TM4SF20Q53R12 229 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 MEIG1Q5JSS6 88 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 C16orf92Q96LL3 132 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 SLX1AQ9BQ83 275 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 RTBDNQ9BSG5 229 aaPredicted RBP4.85□□□□□ -1.63
CBX5-201ENST00000209875 A0A1W2PR80 420 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 CCL8P80075 99 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 SPANXB1Q9NS25 103 aaPredicted RBP4.85□□□□□ -1.63
CBX5-201ENST00000209875 M0R1W7 72 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 PRSS12P56730 875 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 TMEM249Q2WGJ8 235 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 SPINK9Q5DT21 86 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 F2Z2F3 143 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 SLC25A20O43772 301 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 NAPSAO96009 420 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 HIST1H2BLQ99880 126 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 AGMATQ9BSE5 352 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 C21orf62Q9NYP8 219 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 A0A1W2PP11 408 aa4.85□□□□□ -1.63
CBX5-201ENST00000209875 OVOL1O14753 267 aa4.84□□□□□ -1.63
CBX5-201ENST00000209875 C1QL1O75973 258 aa4.84□□□□□ -1.63
CBX5-201ENST00000209875 NBEAP1P0C6P0 100 aa4.84□□□□□ -1.63
CBX5-201ENST00000209875 RRN3P1Q2M238 152 aa4.84□□□□□ -1.63
CBX5-201ENST00000209875 MBD3L4A6NDZ8 208 aaPredicted RBP4.84□□□□□ -1.63
CBX5-201ENST00000209875 MBD3L3A6NE82 208 aaPredicted RBP4.84□□□□□ -1.63
CBX5-201ENST00000209875 MBD3L5A6NJ08 208 aaPredicted RBP4.84□□□□□ -1.63
CBX5-201ENST00000209875 SRSF1Q07955 248 aaKnown RBP eCLIP4.84□□□□□ -1.635e-8■□□□□ 10.4
CBX5-201ENST00000209875 MBD3L2Q8NHZ7 208 aaPredicted RBP4.84□□□□□ -1.63
CBX5-201ENST00000209875 COLQQ9Y215 455 aaPredicted RBP4.84□□□□□ -1.63
CBX5-201ENST00000209875 H7C2G1 150 aa4.84□□□□□ -1.63
CBX5-201ENST00000209875 LEPP41159 167 aa4.84□□□□□ -1.63
CBX5-201ENST00000209875 CX3CL1P78423 397 aa4.84□□□□□ -1.63
CBX5-201ENST00000209875 RNF182Q8N6D2 247 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms