RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 FOXA3P55318 350 aaPredicted RBP12.29□□□□□ -0.44
EFNB1-201ENST00000204961 MAJINQ3KP22 176 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 RBMXL3Q8N7X1 1067 aaKnown RBP12.29□□□□□ -0.44
EFNB1-201ENST00000204961 YPEL2Q96QA6 119 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 CBY1Q9Y3M2 126 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 GGTLC3B5MD39 225 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 SRP14P37108 136 aaKnown RBP12.29□□□□□ -0.44
EFNB1-201ENST00000204961 MMDQ15546 238 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 LPAR2Q9HBW0 351 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 MUC21A0A0G2JKD1 596 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 MUC21A0A140T8X8 626 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 RPEL1Q2QD12 228 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 MUC21Q5SSG8 566 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 ASCL3Q9NQ33 180 aa12.29□□□□□ -0.44
EFNB1-201ENST00000204961 IGHG3P01860 377 aa12.28□□□□□ -0.44
EFNB1-201ENST00000204961 RPL15P61313 204 aaKnown RBP12.28□□□□□ -0.44
EFNB1-201ENST00000204961 RTL8BQ17RB0 113 aa12.28□□□□□ -0.44
EFNB1-201ENST00000204961 ST6GALNAC6Q969X2 333 aa12.28□□□□□ -0.44
EFNB1-201ENST00000204961 GNB4Q9HAV0 340 aa12.28□□□□□ -0.44
EFNB1-201ENST00000204961 DYNLRB1Q9NP97 96 aa12.28□□□□□ -0.44
EFNB1-201ENST00000204961 CACNA1AO00555 2505 aa12.28□□□□□ -0.44
EFNB1-201ENST00000204961 LOC102724200A0A096LPH7 203 aaPredicted RBP12.28□□□□□ -0.44
EFNB1-201ENST00000204961 COX7A2P2O60397 106 aa12.28□□□□□ -0.44
EFNB1-201ENST00000204961 COA6Q5JTJ3 125 aaKnown RBP12.28□□□□□ -0.44
EFNB1-201ENST00000204961 CENPVQ7Z7K6 275 aaPredicted RBP12.28□□□□□ -0.44
EFNB1-201ENST00000204961 GAFA1Q96PS6 74 aa12.28□□□□□ -0.44
EFNB1-201ENST00000204961 IGHV3-35A0A0C4DH35 117 aa12.27□□□□□ -0.44
EFNB1-201ENST00000204961 SH2D7A6NKC9 451 aaPredicted RBP12.27□□□□□ -0.44
EFNB1-201ENST00000204961 MFAP2P55001 183 aa12.27□□□□□ -0.44
EFNB1-201ENST00000204961 Q71RC1 249 aaPredicted RBP12.27□□□□□ -0.44
EFNB1-201ENST00000204961 SIGLECL1Q8N7X8 197 aa12.27□□□□□ -0.44
EFNB1-201ENST00000204961 PRR7Q8TB68 274 aa12.27□□□□□ -0.44
EFNB1-201ENST00000204961 TMEM106BQ9NUM4 274 aa12.27□□□□□ -0.44
EFNB1-201ENST00000204961 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.44
EFNB1-201ENST00000204961 CD40P25942 277 aa12.27□□□□□ -0.45
EFNB1-201ENST00000204961 GLRXP35754 106 aa12.27□□□□□ -0.45
EFNB1-201ENST00000204961 BSPH1Q075Z2 132 aa12.27□□□□□ -0.45
EFNB1-201ENST00000204961 OR2D3Q8NGH3 330 aa12.27□□□□□ -0.45
EFNB1-201ENST00000204961 TXN2Q99757 166 aa12.27□□□□□ -0.45
EFNB1-201ENST00000204961 TM4SF5O14894 197 aa12.27□□□□□ -0.45
EFNB1-201ENST00000204961 VENTXO95231 258 aa12.27□□□□□ -0.45
EFNB1-201ENST00000204961 MT-CO2P00403 227 aa12.27□□□□□ -0.45
EFNB1-201ENST00000204961 IBA57Q5T440 356 aaKnown RBP12.27□□□□□ -0.45
EFNB1-201ENST00000204961 DNAJC4Q9NNZ3 241 aa12.27□□□□□ -0.45
EFNB1-201ENST00000204961 TECRQ9NZ01 308 aaKnown RBP12.27□□□□□ -0.45
EFNB1-201ENST00000204961 ZNF835Q9Y2P0 537 aa12.27□□□□□ -0.45
EFNB1-201ENST00000204961 PTPRBP23467 1997 aa12.27□□□□□ -0.45
EFNB1-201ENST00000204961 TRAV8-1A0A0A6YYK1 113 aa12.26□□□□□ -0.45
EFNB1-201ENST00000204961 CSN3P07498 182 aa12.26□□□□□ -0.45
EFNB1-201ENST00000204961 TNFSF4P23510 183 aa12.26□□□□□ -0.45
EFNB1-201ENST00000204961 TPPP2P59282 170 aa12.26□□□□□ -0.45
EFNB1-201ENST00000204961 TNXAQ16473 311 aa12.26□□□□□ -0.45
EFNB1-201ENST00000204961 IGLV1-44P01699 117 aa12.26□□□□□ -0.45
EFNB1-201ENST00000204961 BRS3P32247 399 aa12.26□□□□□ -0.45
EFNB1-201ENST00000204961 PDLIM4P50479 330 aa12.26□□□□□ -0.45
EFNB1-201ENST00000204961 PLGLAQ15195 96 aa12.26□□□□□ -0.45
EFNB1-201ENST00000204961 MBNL2Q5VZF2 373 aaKnown RBP12.26□□□□□ -0.45
EFNB1-201ENST00000204961 FLYWCH2Q96CP2 140 aaKnown RBP12.26□□□□□ -0.45
EFNB1-201ENST00000204961 ZNF503Q96F45 646 aa12.26□□□□□ -0.45
EFNB1-201ENST00000204961 SLC35E1Q96K37 410 aa12.26□□□□□ -0.45
EFNB1-201ENST00000204961 TBL2Q9Y4P3 447 aaKnown RBP12.26□□□□□ -0.45
EFNB1-201ENST00000204961 RAI1Q7Z5J4 1906 aaPredicted RBP12.25□□□□□ -0.45
EFNB1-201ENST00000204961 RELQ04864 619 aaPredicted RBP12.25□□□□□ -0.45
EFNB1-201ENST00000204961 TMEM183BQ1AE95 376 aa12.25□□□□□ -0.45
EFNB1-201ENST00000204961 TCF24Q7RTU0 167 aa12.25□□□□□ -0.45
EFNB1-201ENST00000204961 IL36BQ9NZH7 164 aa12.25□□□□□ -0.45
EFNB1-201ENST00000204961 RNASEKQ6P5S7 137 aaKnown RBP12.25□□□□□ -0.45
EFNB1-201ENST00000204961 FNDC4Q9H6D8 234 aaPredicted RBP12.25□□□□□ -0.45
EFNB1-201ENST00000204961 KIR2DL5BA0A0G2JN68 375 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 KIR2DL5BA0A0G2JPC4 375 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 APOA2P02652 100 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 USF1P22415 310 aaPredicted RBP12.24□□□□□ -0.45
EFNB1-201ENST00000204961 RAB7AP51149 207 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 ZNF138P52744 262 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 VWC2Q2TAL6 325 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 KIR2DL5AQ8N109 375 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 PMCHL2Q9BQD1 86 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 IL19Q9UHD0 177 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 FBXL7Q9UJT9 491 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 SETD2Q9BYW2 2564 aaPredicted RBP12.24□□□□□ -0.45
EFNB1-201ENST00000204961 DSCAML1Q8TD84 2053 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 ISLRO14498 428 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 SLC25A5P05141 298 aaKnown RBP12.24□□□□□ -0.45
EFNB1-201ENST00000204961 RPL8P62917 257 aaKnown RBP12.24□□□□□ -0.45
EFNB1-201ENST00000204961 PRSS46E5RG02 174 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 UPK2O00526 184 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 AREGP15514 252 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 LINC00310P59036 64 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 ERHP84090 104 aaKnown RBP12.24□□□□□ -0.45
EFNB1-201ENST00000204961 WT1-ASQ06250 92 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 TMEM200BQ69YZ2 307 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 MIEN1Q9BRT3 115 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 SLC45A2Q9UMX9 530 aa12.24□□□□□ -0.45
EFNB1-201ENST00000204961 LSM4Q9Y4Z0 139 aaKnown RBP12.24□□□□□ -0.45
EFNB1-201ENST00000204961 SORL1Q92673 2214 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 DPRXA6NFQ7 191 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 J3QW42 95 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 HINT1P49773 126 aaPredicted RBP12.23□□□□□ -0.45
EFNB1-201ENST00000204961 MZT1Q08AG7 82 aa12.23□□□□□ -0.45
EFNB1-201ENST00000204961 Q56UQ5 140 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms