RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 OR2J3O76001 311 aa9.92□□□□□ -0.82
CHPF2-201ENST00000035307 ZNF672Q499Z4 452 aaPredicted RBP9.92□□□□□ -0.82
CHPF2-201ENST00000035307 GSX1Q9H4S2 264 aaPredicted RBP9.92□□□□□ -0.82
CHPF2-201ENST00000035307 KALRNO60229 2985 aa9.92□□□□□ -0.82
CHPF2-201ENST00000035307 ZNF729A6NN14 1252 aaPredicted RBP9.92□□□□□ -0.82
CHPF2-201ENST00000035307 HYPMO75409 117 aa9.92□□□□□ -0.82
CHPF2-201ENST00000035307 IGKV1-16P04430 117 aa9.92□□□□□ -0.82
CHPF2-201ENST00000035307 SRSF4Q08170 494 aaKnown RBP9.92□□□□□ -0.82
CHPF2-201ENST00000035307 OR4C13Q8NGP0 309 aa9.92□□□□□ -0.82
CHPF2-201ENST00000035307 OR1P1Q8NH06 330 aa9.92□□□□□ -0.82
CHPF2-201ENST00000035307 DNAJC4Q9NNZ3 241 aa9.92□□□□□ -0.82
CHPF2-201ENST00000035307 SMAD7O15105 426 aaKnown RBP9.92□□□□□ -0.82
CHPF2-201ENST00000035307 P01737 135 aa9.92□□□□□ -0.82
CHPF2-201ENST00000035307 CDX1P47902 265 aaPredicted RBP9.92□□□□□ -0.82
CHPF2-201ENST00000035307 ELOBQ15370 118 aa9.92□□□□□ -0.82
CHPF2-201ENST00000035307 CDSNQ15517 529 aa9.92□□□□□ -0.82
CHPF2-201ENST00000035307 ASCL4Q6XD76 172 aa9.92□□□□□ -0.82
CHPF2-201ENST00000035307 AMMECR1Q9Y4X0 333 aaPredicted RBP9.92□□□□□ -0.82
CHPF2-201ENST00000035307 C20orf202A1L168 122 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HIST1H2BKO60814 126 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HIST1H2BJP06899 126 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HIST1H2BOP23527 126 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 FCER1GP30273 86 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 FCGR2BP31994 310 aaPredicted RBP9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HIST1H2BBP33778 126 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HIST1H2BDP58876 126 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HIST1H2BCP62807 126 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 GNG5P63218 68 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 KLRD1Q13241 179 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 LY6EQ16553 131 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HIST2H2BEQ16778 126 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HIST1H2BHQ93079 126 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HIST1H2BNQ99877 126 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HIST1H2BMQ99879 126 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 MRPL18Q9H0U6 180 aaKnown RBP9.91□□□□□ -0.82
CHPF2-201ENST00000035307 SEPSECSQ9HD40 501 aaKnown RBP9.91□□□□□ -0.82
CHPF2-201ENST00000035307 LOC389332A0A1B0GUA5 103 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 ZNF207O43670 478 aaKnown RBP9.91□□□□□ -0.82
CHPF2-201ENST00000035307 PAX9P55771 341 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 ETFRF1Q6IPR1 90 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 SFRP2Q96HF1 295 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 RNF2Q99496 336 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 J3QW42 95 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 M0R2Z0 102 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 MPDU1O75352 247 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 C8orf88P0DMB2 117 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 SPSB3Q6PJ21 355 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 CYP2G1PQ6ZSU1 146 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 MMD2Q8IY49 270 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 NEU1Q99519 415 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 HSPB7Q9UBY9 170 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 FLNCQ14315 2725 aa9.91□□□□□ -0.82
CHPF2-201ENST00000035307 FOXH1O75593 365 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 MMP23AO75900 390 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 IGLV3-1P01715 115 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 THBDP07204 575 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 COX6B1P14854 86 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 AARDQ4LEZ3 155 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 P2RX4Q99571 388 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 PLA2G2EQ9NZK7 142 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 NDUFS6O75380 124 aaKnown RBP9.9□□□□□ -0.82
CHPF2-201ENST00000035307 ORM1P02763 201 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 SRIP30626 198 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 CEACAM3P40198 252 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 LINC00305Q7Z4B0 112 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 S100A7AQ86SG5 101 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 PRSS3P2Q8NHM4 247 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 PGLYRP4Q96LB8 373 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 ASCL2Q99929 193 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 ZNF430Q9H8G1 570 aaPredicted RBP9.9□□□□□ -0.82
CHPF2-201ENST00000035307 GSN-AS1Q9NRJ2 163 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 ELOA3CA0A087WX78 387 aaPredicted RBP9.9□□□□□ -0.82
CHPF2-201ENST00000035307 ST6GALNAC3Q8NDV1 305 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 CBLN4Q9NTU7 201 aa9.9□□□□□ -0.82
CHPF2-201ENST00000035307 HTN1P15515 57 aa9.9□□□□□ -0.83
CHPF2-201ENST00000035307 TREML4Q6UXN2 200 aa9.9□□□□□ -0.83
CHPF2-201ENST00000035307 WFDC3Q8IUB2 231 aa9.9□□□□□ -0.83
CHPF2-201ENST00000035307 RBM14Q96PK6 669 aaKnown RBP9.9□□□□□ -0.83
CHPF2-201ENST00000035307 CHD3Q12873 2000 aaKnown RBP9.89□□□□□ -0.83
CHPF2-201ENST00000035307 F2RL2O00254 374 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 KLF17Q5JT82 389 aaPredicted RBP9.89□□□□□ -0.83
CHPF2-201ENST00000035307 GOLT1AQ6ZVE7 132 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 TCTEX1D1Q8N7M0 179 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 TMEM250H0YL14 139 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 FA2HQ7L5A8 372 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 FAM19A2Q8N3H0 131 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 ANKRD17O75179 2603 aaKnown RBP9.89□□□□□ -0.83
CHPF2-201ENST00000035307 SOD3P08294 240 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 S100A4P26447 101 aaKnown RBP9.89□□□□□ -0.83
CHPF2-201ENST00000035307 TDGF1P3P51864 188 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 HNRNPA3P51991 378 aaKnown RBP9.89□□□□□ -0.83
CHPF2-201ENST00000035307 C19orf35Q6ZS72 473 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 SMIM15Q7Z3B0 74 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 DUX5Q96PT3 197 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 ANAPC10Q9UM13 185 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 UFC1Q9Y3C8 167 aa9.89□□□□□ -0.83
CHPF2-201ENST00000035307 A0A1B0GUS0 222 aa9.88□□□□□ -0.83
CHPF2-201ENST00000035307 RBFOX2O43251 390 aaKnown RBP eCLIP9.88□□□□□ -0.83
CHPF2-201ENST00000035307 MBNL2Q5VZF2 373 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms