RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tmem240B2RWJ3 173 aa10.5□□□□□ -0.73
Trim56-201ENSMUST00000054384 Q3U1D9 316 aa10.5□□□□□ -0.73
Trim56-201ENSMUST00000054384 Tmem50bQ9D1X9 158 aa10.5□□□□□ -0.73
Trim56-201ENSMUST00000054384 TprF6ZDS4 2431 aaKnown RBP10.5□□□□□ -0.73
Trim56-201ENSMUST00000054384 Trav12n-2A0A075B626 113 aa10.5□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm17430F6RSK3 157 aa10.5□□□□□ -0.73
Trim56-201ENSMUST00000054384 Tctn2Q2MV57 700 aa10.5□□□□□ -0.73
Trim56-201ENSMUST00000054384 Tmem212Q8C6V3 187 aa10.5□□□□□ -0.73
Trim56-201ENSMUST00000054384 Abca1P41233 2261 aa10.5□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ldlrad3A2AR95 345 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Dbx1P52950 335 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Parp16Q7TMM8 322 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Obp2aQ8K1H9 176 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Foxn4Q8K3Q3 521 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Cadm4Q8R464 388 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Il24Q925S4 181 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Fcgr4A0A0B4J1G0 249 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 P01673 111 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Fam222bQ6P539 562 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Bglap3P54615 95 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Tmem71Q149F5 287 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Wfdc6aQ3UW55 136 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ubtd1Q91WB7 227 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Rpp25Q91WE3 199 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ighv4-1A0A075B5R5 116 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 P01669 111 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ccsmst1Q6RUT7 136 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gpr135Q7TQP2 457 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Olfr904Q7TRC9 310 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Cd177Q8R2S8 817 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Sh2d1bO35324 132 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 S100a8P27005 89 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Rnf224Q3UIW8 156 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Dtx4Q6PDK8 616 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Rnd1Q8BLR7 232 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Lsm10Q8QZX5 122 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Mob3bQ8VE04 216 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Olfr175-ps1A0A140T8K4 308 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm21981D3Z6Q6 369 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm5108J3QP01 101 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Sgms2Q9D4B1 365 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Tbx21Q9JKD8 530 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Siva1O54926 175 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gbf1Q6DFZ1 1861 aa10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Sptbn1Q62261 2363 aaKnown RBP10.49□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm4779A0A1B0GR91 561 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm14124A2AU83 715 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm7714E9Q079 131 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Rnf165E9QAU8 347 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Brs3O54798 399 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm9837Q8C607 126 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 DynapQ9D7M5 161 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Herpud1Q9JJK5 391 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Plxnd1Q3UH93 1925 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm14409A2ARR8 349 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Prss12O08762 761 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Rac3P60764 192 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Lsm6P62313 80 aaKnown RBP10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 ShbgP97497 403 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 4930474N05RikQ8BVR5 218 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Lrtm1Q8BXQ3 356 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Rae1Q8C570 368 aaKnown RBP10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Utp23Q9CX11 249 aaKnown RBP10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 SpxD3Z752 116 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm9733Q1AN91 178 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Rhbdd1Q8BHC7 315 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Q8C3I9 435 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Tmprss3Q8K1T0 453 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ascl5M0QWB7 188 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 EnamO55196 1274 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Mob4Q6PEB6 225 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Pgam5Q8BX10 288 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Slc52a3Q9D6X5 460 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Wnt16Q9QYS1 364 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gpr34Q9R1K6 375 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Wnt5aP22725 380 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Defa3P28310 93 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Defa10P50708 93 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Defa15P50713 93 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ptp4a1Q63739 173 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Psg16Q8K0U8 395 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Cacna1hO88427 2365 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Cd209gD3Z5D4 194 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Il4P07750 140 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 1700066B19RikQ3TS39 127 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 LgalslQ8VED9 172 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Icam4Q9ERM2 262 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm21244J3QK38 227 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 P01644 108 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 P01645 108 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 P01646 108 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 P01647 108 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 P06323 132 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Cd3eP22646 189 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Bcl2l2P70345 193 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ap5s1Q9D742 170 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Cldn13Q9Z0S4 211 aa10.48□□□□□ -0.73
Trim56-201ENSMUST00000054384 Zfp97E9PZP6 546 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Zfp960L7N267 546 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Il11P47873 199 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms