RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Vsig2Q9Z109 328 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Ighv5-4A0A075B5P9 117 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 SftpcP21841 193 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Vmn1r178Q8R2B6 304 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Rbpms2Q8VC52 206 aaKnown RBP10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Olfr509Q8VF20 321 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Olfr530Q8VFE8 307 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Ndufb8Q9D6J5 186 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Pxmp4Q9JJW0 212 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Slc22a5Q9Z0E8 557 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Vamp5Q9Z2P8 102 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Igsf6P0C6B7 237 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Rps11P62281 158 aaKnown RBP10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Trp53rkaQ5U452 244 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Olfr205Q7TS37 305 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Tp53rkQ99PW4 244 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Dock8Q8C147 2100 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Zdhhc22A0PK84 263 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Olfr1320A2AHM8 319 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Gm21834J3QN05 151 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Psg26Q4KL65 475 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 GalnsQ571E4 520 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Tbr1Q64336 681 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Olfr136Q8VG72 312 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Bdp1Q571C7 2467 aa10.16□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Gm20219A0A1B0GRQ3 87 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Gm5093E9PZB3 174 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Hist1h1eP43274 219 aaKnown RBP10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Zfp974Q3UVF6 752 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 RtbdnQ8QZY4 247 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Neurl1Q923S6 574 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Map1lc3bQ9CQV6 125 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Atf6bO35451 699 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Zfp36P22893 319 aaKnown RBP10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 MamstrQ0ZCJ7 421 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Psg17Q62056 475 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Olfr963Q7TRA9 311 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 March11Q8CBH7 400 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Olfr1392Q8VFA6 311 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Olfr902E9Q6Z7 309 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 P01783 136 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Srp14P16254 110 aaKnown RBP10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Ell3Q80VR2 395 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 H2-M10.4Q85ZW8 331 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 TskuQ8CBR6 354 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Tmem41bQ8K1A5 291 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Tmem107Q9CPV0 140 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Unc119Q9Z2R6 240 aa10.15□□□□□ -0.78
Pcif1-201ENSMUST00000041643 Gm2026A2ART4 498 aa10.15□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Hyal2O35632 473 aa10.15□□□□□ -0.79
Pcif1-201ENSMUST00000041643 MyocosQ3UWS6 143 aa10.15□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Zfp874bQ7M6X2 447 aa10.15□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Crispld2Q8BZQ2 495 aa10.15□□□□□ -0.79
Pcif1-201ENSMUST00000041643 eef1akmt3D3YWP0 232 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm10269G3UWD7 123 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm21789J3QMZ1 123 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm21870J3QPN2 123 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm21883J3QPV3 123 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Siva1O54926 175 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 H3f3cP02301 136 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 H3f3aP84244 136 aaKnown RBP10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 MidnQ3TPJ7 465 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Fam220aQ3ZN08 260 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 RhofQ8BYP3 211 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Sft2d2Q8VD57 159 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1183Q8VFF8 303 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Prss41Q920S2 322 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Sval2Q99N75 144 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 PyyQ9EPS2 98 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ube2l6Q9QZU9 153 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Pi4kaE9Q3L2 2105 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 GzmbP04187 247 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 LgalslQ8VED9 172 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Cds2Q99L43 444 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 FibinQ9CQS3 217 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Dock4P59764 1978 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ighv5-17A0A075B5R1 117 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1438-ps1A0A140LHS9 319 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm572B1ARY8 399 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 ApcsP12246 224 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Rpl27aP14115 148 aaKnown RBP10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Bcl2l2P70345 193 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Vmn1r181Q0P547 304 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 GhitmQ91VC9 346 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 GpnmbQ99P91 574 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gins1Q9CZ15 196 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 FetubQ9QXC1 388 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 PtprdQ64487 1912 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Zfp108E9Q8I5 642 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 P01803 113 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Trav8d-1Q5R1H8 112 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Prss45Q8K4I7 317 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1044Q8VGR9 314 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Igkv4-50A0A0B4J1J0 117 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 D7Ertd443eD2J0Y4 644 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Q3TEI4 1023 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Rgs13Q8K443 158 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr492Q8VFD1 314 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Hdhd3Q9CYW4 251 aa10.14□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Apc2Q9Z1K7 2274 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms