RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-223ENST00000640001 ELOA3CA0A087WX78 387 aaPredicted RBP6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 H0YJW9 148 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 THBDP07204 575 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 WNT2P09544 360 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 CD24P25063 80 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 VDAC2P45880 294 aaPredicted RBP6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 IER3P46695 156 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 FXYD3Q14802 87 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 ARSJQ5FYB0 599 aaPredicted RBP6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 C9orf152Q5JTZ5 239 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 MRPL54Q6P161 138 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 Q8TCH9 128 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 RNF2Q99496 336 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 PARD6GQ9BYG4 376 aaPredicted RBP6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 WDFY4Q6ZS81 3184 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 SLC17A3O00476 420 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 FOXH1O75593 365 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 CDX1P47902 265 aaPredicted RBP6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 LGALS7P47929 136 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 TXNDC17Q9BRA2 123 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 FAM103A1Q9BTL3 118 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 GNB4Q9HAV0 340 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 PITPNC1Q9UKF7 332 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 TRBV23-1A0A0A0MS06 115 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 TRAV20A0A0B4J274 112 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 C5orf52A6NGY3 159 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 PROP1O75360 226 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 COL8A2P25067 703 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 HTR1DP28221 377 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 RPL29P47914 159 aaKnown RBP6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 DIAPH2-AS1Q14236 149 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 Q56UQ5 140 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 PERPQ96FX8 193 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 SFRP2Q96HF1 295 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 BET1LQ9NYM9 111 aa6.33□□□□□ -1.4
HNRNPU-223ENST00000640001 SRRM4A7MD48 611 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST1H2BKO60814 126 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST1H2BJP06899 126 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 LIPFP07098 398 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 STAG3L2P0CL84 134 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 STAG3L3P0CL85 134 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 IGHV1-8P0DP01 117 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST1H2BOP23527 126 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST1H2BBP33778 126 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 SRP14P37108 136 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST1H2BDP58876 126 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST1H2BCP62807 126 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 CD69Q07108 199 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST2H2BEQ16778 126 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 CENPWQ5EE01 88 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 LHFPL4Q7Z7J7 247 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 OR1L6Q8NGR2 347 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST1H2BHQ93079 126 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST1H2BNQ99877 126 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST1H2BMQ99879 126 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 RASL11BQ9BPW5 248 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 CACNA1BQ00975 2339 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 TNCP24821 2201 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 GATCO43716 136 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 HYPMO75409 117 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 VENTXO95231 258 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 GRNP28799 593 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 OR5I1Q13606 314 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 ZNF672Q499Z4 452 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 OR8I2Q8N0Y5 310 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 SRD5A3Q9H8P0 318 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 TMEM14BQ9NUH8 114 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 ZNF257Q9Y2Q1 563 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 ITGB1BP1O14713 200 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 NTF3P20783 257 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 SELENOTP62341 195 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 GAMTQ14353 236 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 GFI1BQ5VTD9 330 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 TEX36Q5VZQ5 186 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 Q8NA96 180 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 S4R3C0 116 aa6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 ANKRD11Q6UB99 2663 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-223ENST00000640001 LOC105371242A0A075B767 164 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 TRAV5A0A0B4J249 113 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 SNURFLB1AK76 121 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 PAX6P26367 422 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 CDKN1AP38936 164 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 COL25A1Q9BXS0 654 aaPredicted RBP6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 MSRB2Q9Y3D2 182 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 TRAV34A0A0B4J273 112 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 CAMPP49913 170 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 FAM222BQ8WU58 562 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 CELSR3Q9NYQ7 3312 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 IGHV2-26A0A0B4J1V2 119 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 UBE2CO00762 179 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 GNG7O60262 68 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 PYYP10082 97 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 HIST1H1BP16401 226 aaKnown RBP6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 HOXA5P20719 270 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 LOXP28300 417 aaPredicted RBP6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 TDGF1P3P51864 188 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 ATP5IP56385 69 aaPredicted RBP6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 LINC00305Q7Z4B0 112 aa6.31□□□□□ -1.4
HNRNPU-223ENST00000640001 OR1P1Q8NH06 330 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms