RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 CTSGP08311 255 aa13.51□□□□□ -0.25
SPIN3-220ENST00000639257 RNASE2P10153 161 aaKnown RBP13.51□□□□□ -0.25
SPIN3-220ENST00000639257 SPCS3P61009 180 aa13.51□□□□□ -0.25
SPIN3-220ENST00000639257 DEFB114Q30KQ6 69 aa13.51□□□□□ -0.25
SPIN3-220ENST00000639257 LCN12Q6JVE5 192 aa13.51□□□□□ -0.25
SPIN3-220ENST00000639257 PLET1Q6UQ28 207 aa13.51□□□□□ -0.25
SPIN3-220ENST00000639257 LINC00299Q6ZSB3 139 aa13.51□□□□□ -0.25
SPIN3-220ENST00000639257 TMEM190Q8WZ59 177 aa13.51□□□□□ -0.25
SPIN3-220ENST00000639257 TXN2Q99757 166 aa13.51□□□□□ -0.25
SPIN3-220ENST00000639257 CHRDL1Q9BU40 450 aa13.51□□□□□ -0.25
SPIN3-220ENST00000639257 IFNA17P01571 189 aa13.5□□□□□ -0.25
SPIN3-220ENST00000639257 AKR1C4P17516 323 aa13.5□□□□□ -0.25
SPIN3-220ENST00000639257 CBLN1P23435 193 aa13.5□□□□□ -0.25
SPIN3-220ENST00000639257 SRPXP78539 464 aa13.5□□□□□ -0.25
SPIN3-220ENST00000639257 CD300EQ496F6 205 aaPredicted RBP13.5□□□□□ -0.25
SPIN3-220ENST00000639257 SPINK9Q5DT21 86 aa13.5□□□□□ -0.25
SPIN3-220ENST00000639257 LRTM2Q8N967 370 aa13.5□□□□□ -0.25
SPIN3-220ENST00000639257 TECRQ9NZ01 308 aaKnown RBP13.5□□□□□ -0.25
SPIN3-220ENST00000639257 PRR13Q9NZ81 148 aa13.5□□□□□ -0.25
SPIN3-220ENST00000639257 CACNG5Q9UF02 275 aa13.5□□□□□ -0.25
SPIN3-220ENST00000639257 IGHV3-21A0A0B4J1V1 117 aa13.49□□□□□ -0.25
SPIN3-220ENST00000639257 NAP1L6A6NFF2 107 aa13.49□□□□□ -0.25
SPIN3-220ENST00000639257 OR2T8A6NH00 312 aa13.49□□□□□ -0.25
SPIN3-220ENST00000639257 ZNF785A8K8V0 405 aa13.49□□□□□ -0.25
SPIN3-220ENST00000639257 NDUFA4O00483 81 aa13.49□□□□□ -0.25
SPIN3-220ENST00000639257 MT-CO2P00403 227 aa13.49□□□□□ -0.25
SPIN3-220ENST00000639257 BTCP35070 178 aa13.49□□□□□ -0.25
SPIN3-220ENST00000639257 CD69Q07108 199 aa13.49□□□□□ -0.25
SPIN3-220ENST00000639257 RBMS2Q15434 407 aaKnown RBP13.49□□□□□ -0.25
SPIN3-220ENST00000639257 RNASE11Q8TAA1 199 aaKnown RBP13.49□□□□□ -0.25
SPIN3-220ENST00000639257 MARC2Q969Z3 335 aa13.49□□□□□ -0.25
SPIN3-220ENST00000639257 PDCD10Q9BUL8 212 aa13.49□□□□□ -0.25
SPIN3-220ENST00000639257 GAR1Q9NY12 217 aaKnown RBP13.49□□□□□ -0.25
SPIN3-220ENST00000639257 CACFD1Q9UGQ2 172 aa13.49□□□□□ -0.25
SPIN3-220ENST00000639257 DUXBA0A1W2PPF3 345 aa13.48□□□□□ -0.25
SPIN3-220ENST00000639257 A6NHS1 94 aa13.48□□□□□ -0.25
SPIN3-220ENST00000639257 ANXA3P12429 323 aa13.48□□□□□ -0.25
SPIN3-220ENST00000639257 ZNF57Q68EA5 555 aaPredicted RBP13.48□□□□□ -0.25
SPIN3-220ENST00000639257 LYZL2Q7Z4W2 148 aa13.48□□□□□ -0.25
SPIN3-220ENST00000639257 LGI3Q8N145 548 aa13.48□□□□□ -0.25
SPIN3-220ENST00000639257 CACNG8Q8WXS5 425 aa13.48□□□□□ -0.25
SPIN3-220ENST00000639257 MISP3Q96FF7 219 aa13.48□□□□□ -0.25
SPIN3-220ENST00000639257 PALMDQ9NP74 551 aa13.48□□□□□ -0.25
SPIN3-220ENST00000639257 C19orf73Q9NVV2 129 aa13.48□□□□□ -0.25
SPIN3-220ENST00000639257 PIGBOS1A0A0B4J2F0 54 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 K7EMT4 169 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 CORTO00230 105 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 NDUFB6O95139 128 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 NHLRC4P0CG21 123 aaPredicted RBP13.47□□□□□ -0.25
SPIN3-220ENST00000639257 SULT1A3P0DMM9 295 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 SULT1A4P0DMN0 295 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 IL7P13232 177 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 SNCAP37840 140 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 HOXA1P49639 335 aaPredicted RBP13.47□□□□□ -0.25
SPIN3-220ENST00000639257 CCR6P51684 374 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 MFAP4P55083 255 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 UBE2MP61081 183 aaKnown RBP13.47□□□□□ -0.25
SPIN3-220ENST00000639257 TM4SF20Q53R12 229 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 TRIQKQ629K1 86 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 C7orf50Q9BRJ6 194 aaKnown RBP13.47□□□□□ -0.25
SPIN3-220ENST00000639257 FNDC4Q9H6D8 234 aaPredicted RBP13.47□□□□□ -0.25
SPIN3-220ENST00000639257 MRPL27Q9P0M9 148 aaKnown RBP13.47□□□□□ -0.25
SPIN3-220ENST00000639257 HSPB7Q9UBY9 170 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 MLXQ9UH92 298 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 UFC1Q9Y3C8 167 aa13.47□□□□□ -0.25
SPIN3-220ENST00000639257 ZNF320A2RRD8 509 aa13.46□□□□□ -0.25
SPIN3-220ENST00000639257 PITX3O75364 302 aa13.46□□□□□ -0.25
SPIN3-220ENST00000639257 SUB1P53999 127 aaKnown RBP eCLIP13.46□□□□□ -0.25
SPIN3-220ENST00000639257 PPP1R1AQ13522 171 aa13.46□□□□□ -0.25
SPIN3-220ENST00000639257 ANKRD55Q3KP44 614 aa13.46□□□□□ -0.25
SPIN3-220ENST00000639257 C2orf83Q53S99 150 aa13.46□□□□□ -0.25
SPIN3-220ENST00000639257 C11orf87Q6NUJ2 197 aa13.46□□□□□ -0.25
SPIN3-220ENST00000639257 TMED4Q7Z7H5 227 aa13.46□□□□□ -0.25
SPIN3-220ENST00000639257 UXS1Q8NBZ7 420 aa13.46□□□□□ -0.25
SPIN3-220ENST00000639257 TMEM170AQ8WVE7 144 aa13.46□□□□□ -0.25
SPIN3-220ENST00000639257 OR10C1Q96KK4 312 aa13.46□□□□□ -0.25
SPIN3-220ENST00000639257 DAZ1Q9NQZ3 744 aaKnown RBP13.46□□□□□ -0.25
SPIN3-220ENST00000639257 IGHV3-35A0A0C4DH35 117 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 A0A1B0GU03 582 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 SFT2D2O95562 160 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 FRMD6-AS1P0C7T7 363 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 SLC25A6P12236 298 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 HTR2BP41595 481 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 TNFRSF9Q07011 255 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 SMCO1Q147U7 214 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 Q56UQ5 140 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 TMEM61Q8N0U2 210 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 CENPSQ8N2Z9 138 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 DYNLRB2Q8TF09 96 aa13.45□□□□□ -0.26
SPIN3-220ENST00000639257 HUWE1Q7Z6Z7 4374 aaKnown RBP13.44□□□□□ -0.26
SPIN3-220ENST00000639257 C15orf62A8K5M9 175 aa13.44□□□□□ -0.26
SPIN3-220ENST00000639257 IGHV4-30-4P0DP06 118 aa13.44□□□□□ -0.26
SPIN3-220ENST00000639257 UBAC2Q8NBM4 344 aa13.44□□□□□ -0.26
SPIN3-220ENST00000639257 PINX1Q96BK5 328 aaKnown RBP13.44□□□□□ -0.26
SPIN3-220ENST00000639257 ENY2Q9NPA8 101 aa13.44□□□□□ -0.26
SPIN3-220ENST00000639257 MRPL36Q9P0J6 103 aaKnown RBP13.44□□□□□ -0.26
SPIN3-220ENST00000639257 STAB2Q8WWQ8 2551 aa13.44□□□□□ -0.26
SPIN3-220ENST00000639257 TRAV25A0A0B4J276 109 aa13.43□□□□□ -0.26
SPIN3-220ENST00000639257 PLA2G10O15496 165 aa13.43□□□□□ -0.26
SPIN3-220ENST00000639257 NUPL2O15504 423 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms