RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CENPXA8MT69 81 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 CYB5BO43169 146 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 LYRM1O43325 122 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 IGLV1-51P01701 117 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 ANXA7P20073 488 aaKnown RBP16.56■□□□□ 0.24
SCN1B-206ENST00000638536 TATDN3Q17R31 274 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 FAM209BQ5JX69 171 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 UNQ9165/PRO28630Q6UXU0 137 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 GPHB5Q86YW7 130 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 OR1L6Q8NGR2 347 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 OR52E5Q8NH55 327 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 PINX1Q96BK5 328 aaKnown RBP16.56■□□□□ 0.24
SCN1B-206ENST00000638536 ZNF414Q96IQ9 312 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 CHRDL1Q9BU40 450 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 BATF3Q9NR55 127 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 C21orf62Q9NYP8 219 aa16.56■□□□□ 0.24
SCN1B-206ENST00000638536 MT-CO2P00403 227 aa16.55■□□□□ 0.24
SCN1B-206ENST00000638536 SULT1A3P0DMM9 295 aa16.55■□□□□ 0.24
SCN1B-206ENST00000638536 SULT1A4P0DMN0 295 aa16.55■□□□□ 0.24
SCN1B-206ENST00000638536 PVRIGQ6DKI7 326 aa16.55■□□□□ 0.24
SCN1B-206ENST00000638536 LRTM2Q8N967 370 aa16.55■□□□□ 0.24
SCN1B-206ENST00000638536 UBAC2Q8NBM4 344 aa16.55■□□□□ 0.24
SCN1B-206ENST00000638536 CCDC32Q9BV29 185 aa16.55■□□□□ 0.24
SCN1B-206ENST00000638536 ZNF256Q9Y2P7 627 aaPredicted RBP16.55■□□□□ 0.24
SCN1B-206ENST00000638536 SELENOKQ9Y6D0 94 aa16.55■□□□□ 0.24
SCN1B-206ENST00000638536 C9orf170A2RU37 121 aa16.54■□□□□ 0.24
SCN1B-206ENST00000638536 TGOLN2O43493 480 aa16.54■□□□□ 0.24
SCN1B-206ENST00000638536 ADMP35318 185 aa16.54■□□□□ 0.24
SCN1B-206ENST00000638536 MLANAQ16655 118 aa16.54■□□□□ 0.24
SCN1B-206ENST00000638536 BSXQ3C1V8 233 aa16.54■□□□□ 0.24
SCN1B-206ENST00000638536 PLET1Q6UQ28 207 aa16.54■□□□□ 0.24
SCN1B-206ENST00000638536 SNCAP37840 140 aa16.53■□□□□ 0.24
SCN1B-206ENST00000638536 SRPXP78539 464 aa16.53■□□□□ 0.24
SCN1B-206ENST00000638536 SMCO1Q147U7 214 aa16.53■□□□□ 0.24
SCN1B-206ENST00000638536 DEFB121Q5J5C9 76 aa16.53■□□□□ 0.24
SCN1B-206ENST00000638536 S100ZQ8WXG8 99 aa16.53■□□□□ 0.24
SCN1B-206ENST00000638536 CACNG8Q8WXS5 425 aa16.53■□□□□ 0.24
SCN1B-206ENST00000638536 TBC1D24Q9ULP9 559 aa16.53■□□□□ 0.24
SCN1B-206ENST00000638536 ZNF320A2RRD8 509 aa16.52■□□□□ 0.24
SCN1B-206ENST00000638536 IZUMO1RA6ND01 250 aa16.52■□□□□ 0.24
SCN1B-206ENST00000638536 LY86O95711 162 aa16.52■□□□□ 0.24
SCN1B-206ENST00000638536 OR4E1P0C645 316 aa16.52■□□□□ 0.24
SCN1B-206ENST00000638536 TMEM170AQ8WVE7 144 aa16.52■□□□□ 0.24
SCN1B-206ENST00000638536 ENY2Q9NPA8 101 aa16.52■□□□□ 0.24
SCN1B-206ENST00000638536 C2orf70A6NJV1 201 aa16.52■□□□□ 0.23
SCN1B-206ENST00000638536 CEBPZOSA8MTT3 80 aa16.52■□□□□ 0.23
SCN1B-206ENST00000638536 LGALS9O00182 355 aa16.52■□□□□ 0.23
SCN1B-206ENST00000638536 CTSGP08311 255 aa16.52■□□□□ 0.23
SCN1B-206ENST00000638536 HOXB5P09067 269 aa16.52■□□□□ 0.23
SCN1B-206ENST00000638536 IFITM3Q01628 133 aa16.52■□□□□ 0.23
SCN1B-206ENST00000638536 DHRS2Q13268 280 aa16.52■□□□□ 0.23
SCN1B-206ENST00000638536 Q56UQ5 140 aa16.52■□□□□ 0.23
SCN1B-206ENST00000638536 FNDC4Q9H6D8 234 aaPredicted RBP16.52■□□□□ 0.23
SCN1B-206ENST00000638536 MRPL36Q9P0J6 103 aaKnown RBP16.52■□□□□ 0.23
SCN1B-206ENST00000638536 PEMTQ9UBM1 199 aa16.52■□□□□ 0.23
SCN1B-206ENST00000638536 TMEM213A2RRL7 107 aa16.51■□□□□ 0.23
SCN1B-206ENST00000638536 PITX3O75364 302 aa16.51■□□□□ 0.23
SCN1B-206ENST00000638536 UBE2MP61081 183 aaKnown RBP16.51■□□□□ 0.23
SCN1B-206ENST00000638536 TNFRSF9Q07011 255 aa16.51■□□□□ 0.23
SCN1B-206ENST00000638536 TM4SF20Q53R12 229 aa16.51■□□□□ 0.23
SCN1B-206ENST00000638536 BSCL2Q96G97 398 aaPredicted RBP16.51■□□□□ 0.23
SCN1B-206ENST00000638536 ZNF436Q9C0F3 470 aaPredicted RBP16.51■□□□□ 0.23
SCN1B-206ENST00000638536 HEYLQ9NQ87 328 aaPredicted RBP16.51■□□□□ 0.23
SCN1B-206ENST00000638536 SIGLEC8Q9NYZ4 499 aa16.51■□□□□ 0.23
SCN1B-206ENST00000638536 HSPB7Q9UBY9 170 aa16.51■□□□□ 0.23
SCN1B-206ENST00000638536 ZMAT5Q9UDW3 170 aaKnown RBP16.51■□□□□ 0.23
SCN1B-206ENST00000638536 LSM4Q9Y4Z0 139 aaKnown RBP16.51■□□□□ 0.23
SCN1B-206ENST00000638536 A0A1B0GU03 582 aa16.5■□□□□ 0.23
SCN1B-206ENST00000638536 DUXBA0A1W2PPF3 345 aa16.5■□□□□ 0.23
SCN1B-206ENST00000638536 ADAP1O75689 374 aa16.5■□□□□ 0.23
SCN1B-206ENST00000638536 FOLR2P14207 255 aa16.5■□□□□ 0.23
SCN1B-206ENST00000638536 OR52B4Q8NGK2 314 aa16.5■□□□□ 0.23
SCN1B-206ENST00000638536 C20orf85Q9H1P6 137 aa16.5■□□□□ 0.23
SCN1B-206ENST00000638536 RBKSQ9H477 322 aa16.5■□□□□ 0.23
SCN1B-206ENST00000638536 IGHV3OR16-8A0A075B7F1 116 aa16.49■□□□□ 0.23
SCN1B-206ENST00000638536 MPTX1A8MV57 137 aa16.49■□□□□ 0.23
SCN1B-206ENST00000638536 TCRBP04435 133 aa16.49■□□□□ 0.23
SCN1B-206ENST00000638536 GP9P14770 177 aa16.49■□□□□ 0.23
SCN1B-206ENST00000638536 MFAP4P55083 255 aa16.49■□□□□ 0.23
SCN1B-206ENST00000638536 FAM106AQ4KMX7 169 aa16.49■□□□□ 0.23
SCN1B-206ENST00000638536 LYG2Q86SG7 212 aa16.49■□□□□ 0.23
SCN1B-206ENST00000638536 ZNF846Q147U1 533 aa16.48■□□□□ 0.23
SCN1B-206ENST00000638536 GGNBP1Q5YKI7 109 aa16.48■□□□□ 0.23
SCN1B-206ENST00000638536 OR1S1Q8NH92 325 aa16.48■□□□□ 0.23
SCN1B-206ENST00000638536 TRAV6A0A075B6T7 132 aa16.48■□□□□ 0.23
SCN1B-206ENST00000638536 A8MWP6 167 aa16.48■□□□□ 0.23
SCN1B-206ENST00000638536 CBLN1P23435 193 aa16.48■□□□□ 0.23
SCN1B-206ENST00000638536 FCGR2BP31994 310 aaPredicted RBP16.48■□□□□ 0.23
SCN1B-206ENST00000638536 SUB1P53999 127 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCN1B-206ENST00000638536 C4orf46Q504U0 113 aa16.48■□□□□ 0.23
SCN1B-206ENST00000638536 SPSB3Q6PJ21 355 aa16.48■□□□□ 0.23
SCN1B-206ENST00000638536 ATP6V0BQ99437 205 aa16.48■□□□□ 0.23
SCN1B-206ENST00000638536 TMED3Q9Y3Q3 217 aa16.48■□□□□ 0.23
SCN1B-206ENST00000638536 HTR2BP41595 481 aa16.47■□□□□ 0.23
SCN1B-206ENST00000638536 CD300EQ496F6 205 aaPredicted RBP16.47■□□□□ 0.23
SCN1B-206ENST00000638536 C2orf83Q53S99 150 aa16.47■□□□□ 0.23
SCN1B-206ENST00000638536 SLC24A4Q8NFF2 622 aa16.47■□□□□ 0.23
SCN1B-206ENST00000638536 WDR12Q9GZL7 423 aaKnown RBP16.47■□□□□ 0.23
SCN1B-206ENST00000638536 UPK1BO75841 260 aa16.46■□□□□ 0.23
SCN1B-206ENST00000638536 DEFB114Q30KQ6 69 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms