RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 PMS2P11Q13670 270 aa16.9■□□□□ 0.3
CHRNA7-229ENST00000637552 SPINK9Q5DT21 86 aa16.9■□□□□ 0.3
CHRNA7-229ENST00000637552 ARRDC1Q8N5I2 433 aa16.9■□□□□ 0.3
CHRNA7-229ENST00000637552 NXF2Q9GZY0 626 aaKnown RBP16.9■□□□□ 0.3
CHRNA7-229ENST00000637552 EXTL2Q9UBQ6 330 aa16.9■□□□□ 0.3
CHRNA7-229ENST00000637552 KLK11Q9UBX7 282 aa16.9■□□□□ 0.3
CHRNA7-229ENST00000637552 CHEK1O14757 476 aa16.89■□□□□ 0.29
CHRNA7-229ENST00000637552 ATG12O94817 140 aa16.89■□□□□ 0.29
CHRNA7-229ENST00000637552 SNCAP37840 140 aa16.89■□□□□ 0.29
CHRNA7-229ENST00000637552 IZUMO4Q1ZYL8 232 aa16.89■□□□□ 0.29
CHRNA7-229ENST00000637552 LYG2Q86SG7 212 aa16.89■□□□□ 0.29
CHRNA7-229ENST00000637552 SLC35G3Q8N808 338 aa16.89■□□□□ 0.29
CHRNA7-229ENST00000637552 GALNT14Q96FL9 552 aa16.89■□□□□ 0.29
CHRNA7-229ENST00000637552 OR10C1Q96KK4 312 aa16.89■□□□□ 0.29
CHRNA7-229ENST00000637552 TRAV14DV4A0A0A6YYC5 116 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 CD3DP04234 171 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 TBPP20226 339 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 TFPI2P48307 235 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 PPP5CP53041 499 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 TNFRSF9Q07011 255 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 LHFPL1Q86WI0 220 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 OR52I2Q8NH67 350 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 ZNF414Q96IQ9 312 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 TP53RKQ96S44 253 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 GINS3Q9BRX5 216 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 PDCD10Q9BUL8 212 aa16.88■□□□□ 0.29
CHRNA7-229ENST00000637552 IGKV3-7A0A075B6H7 116 aa16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 GABARAPO95166 117 aa16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 IFNA17P01571 189 aa16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 IGKV1-5P01602 117 aa16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 ZNF182P17025 639 aaPredicted RBP16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 NPBWR1P48145 328 aa16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 CMC4P56277 68 aaPredicted RBP16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 TRIM16LQ309B1 348 aa16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 DUSP18Q8NEJ0 188 aa16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 RNF183Q96D59 192 aa16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 NAA50Q9GZZ1 169 aaKnown RBP16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 COPZ2Q9P299 210 aa16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 MTFP1Q9UDX5 166 aa16.87■□□□□ 0.29
CHRNA7-229ENST00000637552 IGHV3OR16-13A0A075B7E8 117 aa16.86■□□□□ 0.29
CHRNA7-229ENST00000637552 IGHV3-74A0A0B4J1X5 117 aa16.86■□□□□ 0.29
CHRNA7-229ENST00000637552 C3orf85A0A1B0GTC6 90 aa16.86■□□□□ 0.29
CHRNA7-229ENST00000637552 CTF1Q16619 201 aa16.86■□□□□ 0.29
CHRNA7-229ENST00000637552 APRG1Q8IVJ8 170 aa16.86■□□□□ 0.29
CHRNA7-229ENST00000637552 CCDC71LQ8N9Z2 235 aa16.86■□□□□ 0.29
CHRNA7-229ENST00000637552 C15orf40Q8WUR7 153 aa16.86■□□□□ 0.29
CHRNA7-229ENST00000637552 MAP6D1Q9H9H5 199 aa16.86■□□□□ 0.29
CHRNA7-229ENST00000637552 NUPR2A6NF83 97 aa16.85■□□□□ 0.29
CHRNA7-229ENST00000637552 ST8SIA3O43173 380 aa16.85■□□□□ 0.29
CHRNA7-229ENST00000637552 RNASE11Q8TAA1 199 aaKnown RBP16.85■□□□□ 0.29
CHRNA7-229ENST00000637552 ZFAND1Q8TCF1 268 aa16.85■□□□□ 0.29
CHRNA7-229ENST00000637552 A0A0B4J293 547 aa16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 HOXA1P49639 335 aaPredicted RBP16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 SUB1P53999 127 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 TAS2R19P59542 299 aa16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 PAFAH1B2P68402 229 aa16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 SCGB2B2Q4G0G5 96 aa16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 TOMM20LQ6UXN7 152 aa16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 GBGT1Q8N5D6 347 aa16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 TMEM217Q8N7C4 229 aa16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 RRNAD1Q96FB5 475 aaKnown RBP16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 ABHD1Q96SE0 405 aa16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 ENY2Q9NPA8 101 aa16.84■□□□□ 0.29
CHRNA7-229ENST00000637552 INS-IGF2F8WCM5 200 aa16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 CORTO00230 105 aa16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 CD5P06127 495 aa16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 P0C879 139 aa16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 EWSR1Q01844 656 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 ZNF124Q15973 351 aa16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 GPR107Q5VW38 600 aa16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 ZNF600Q6ZNG1 722 aa16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 TCF24Q7RTU0 167 aa16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 OR4D10Q8NGI6 311 aa16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 TERB2Q8NHR7 220 aa16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 PUS1Q9Y606 427 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHRNA7-229ENST00000637552 RAB3DO95716 219 aa16.82■□□□□ 0.28
CHRNA7-229ENST00000637552 SMIM18P0DKX4 95 aa16.82■□□□□ 0.28
CHRNA7-229ENST00000637552 ETV6P41212 452 aa16.82■□□□□ 0.28
CHRNA7-229ENST00000637552 SP6Q3SY56 376 aa16.82■□□□□ 0.28
CHRNA7-229ENST00000637552 FAM90A2PQ658T7 463 aa16.82■□□□□ 0.28
CHRNA7-229ENST00000637552 TMEM229BQ8NBD8 167 aa16.82■□□□□ 0.28
CHRNA7-229ENST00000637552 OR13C8Q8NGS7 320 aa16.82■□□□□ 0.28
CHRNA7-229ENST00000637552 LINC00476Q8WZB0 136 aa16.82■□□□□ 0.28
CHRNA7-229ENST00000637552 ST8SIA2Q92186 375 aa16.82■□□□□ 0.28
CHRNA7-229ENST00000637552 CD74P04233 296 aa16.81■□□□□ 0.28
CHRNA7-229ENST00000637552 ATF4P18848 351 aaPredicted RBP16.81■□□□□ 0.28
CHRNA7-229ENST00000637552 UCP1P25874 307 aa16.81■□□□□ 0.28
CHRNA7-229ENST00000637552 STEAP1BQ6NZ63 245 aa16.81■□□□□ 0.28
CHRNA7-229ENST00000637552 MARCH1Q8TCQ1 289 aa16.81■□□□□ 0.28
CHRNA7-229ENST00000637552 CSTL1Q9H114 145 aa16.81■□□□□ 0.28
CHRNA7-229ENST00000637552 MPTX1A8MV57 137 aa16.8■□□□□ 0.28
CHRNA7-229ENST00000637552 DNASE2O00115 360 aaPredicted RBP16.8■□□□□ 0.28
CHRNA7-229ENST00000637552 RGS5O15539 181 aa16.8■□□□□ 0.28
CHRNA7-229ENST00000637552 SCGB2A1O75556 95 aa16.8■□□□□ 0.28
CHRNA7-229ENST00000637552 B3GALNT1O75752 331 aa16.8■□□□□ 0.28
CHRNA7-229ENST00000637552 RNASE2P10153 161 aaKnown RBP16.8■□□□□ 0.28
CHRNA7-229ENST00000637552 TMEM231Q9H6L2 316 aa16.8■□□□□ 0.28
CHRNA7-229ENST00000637552 VSIRQ9H7M9 311 aa16.8■□□□□ 0.28
CHRNA7-229ENST00000637552 IGHV3-66A0A0C4DH42 116 aa16.79■□□□□ 0.28
CHRNA7-229ENST00000637552 GABARAPH6UMI1 98 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms