RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 AREGP15514 252 aa12.16□□□□□ -0.46
CLN6-219ENST00000637329 FAM74A1Q5RGS3 127 aa12.16□□□□□ -0.46
CLN6-219ENST00000637329 CENPVQ7Z7K6 275 aaPredicted RBP12.16□□□□□ -0.46
CLN6-219ENST00000637329 OR2G3Q8NGZ4 309 aa12.16□□□□□ -0.46
CLN6-219ENST00000637329 SAT2Q96F10 170 aaPredicted RBP12.16□□□□□ -0.46
CLN6-219ENST00000637329 SH3BGRL3Q9H299 93 aa12.16□□□□□ -0.46
CLN6-219ENST00000637329 PRDM13Q9H4Q3 707 aa12.16□□□□□ -0.46
CLN6-219ENST00000637329 NPVFQ9HCQ7 196 aa12.16□□□□□ -0.46
CLN6-219ENST00000637329 C17orf112F2Z3M2 114 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 CRYGCP07315 174 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 CTRB1P17538 263 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 FGF7P21781 194 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 SERF2P84101 59 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 NDPQ00604 133 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 RUNX1Q01196 453 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 CD69Q07108 199 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 KRTAP1-1Q07627 177 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 DEFB112Q30KQ8 113 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 ARSJQ5FYB0 599 aaPredicted RBP12.15□□□□□ -0.46
CLN6-219ENST00000637329 CTRB2Q6GPI1 263 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 ETFRF1Q6IPR1 90 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 DPPA3Q6W0C5 159 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 SLC16A13Q7RTY0 426 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 TMEM68Q96MH6 324 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 NPCDR1Q9BY65 106 aa12.15□□□□□ -0.46
CLN6-219ENST00000637329 SMCO3A2RU48 225 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 BTBD17A6NE02 478 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 FAM157CP0CG43 387 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 CRIP2P52943 208 aaPredicted RBP12.14□□□□□ -0.47
CLN6-219ENST00000637329 AKR1C1Q04828 323 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 BTNL8Q6UX41 500 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 TREML4Q6UXN2 200 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 Q71RC1 249 aaPredicted RBP12.14□□□□□ -0.47
CLN6-219ENST00000637329 TMEM219Q86XT9 240 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 ZNF709Q8N972 641 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 SGMS2Q8NHU3 365 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 SLC35E1Q96K37 410 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 MED9Q9NWA0 146 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 LSM4Q9Y4Z0 139 aaKnown RBP12.14□□□□□ -0.47
CLN6-219ENST00000637329 TNCP24821 2201 aa12.14□□□□□ -0.47
CLN6-219ENST00000637329 SVEP1Q4LDE5 3571 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 LINC00862A6NCI5 91 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 REG1AP05451 166 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 HNF1AP20823 631 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 OPRK1P41145 380 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 IER3P46695 156 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 BLOC1S1P78537 153 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 TEPPQ6URK8 271 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 TMEM182Q6ZP80 229 aaPredicted RBP12.13□□□□□ -0.47
CLN6-219ENST00000637329 TMEM144Q7Z5S9 345 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 C22orf15Q8WYQ4 148 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 HSPB9Q9BQS6 159 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 TMEM160Q9NX00 188 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 FBXO7Q9Y3I1 522 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 ZANQ9Y493 2812 aa12.13□□□□□ -0.47
CLN6-219ENST00000637329 MDFIC2A0A1B0GVS7 189 aa12.12□□□□□ -0.47
CLN6-219ENST00000637329 ZNF705EA8MWA4 302 aaPredicted RBP12.12□□□□□ -0.47
CLN6-219ENST00000637329 SCGB2A2Q13296 93 aa12.12□□□□□ -0.47
CLN6-219ENST00000637329 RAB31Q13636 194 aa12.12□□□□□ -0.47
CLN6-219ENST00000637329 AKR1C8PQ5T2L2 129 aa12.12□□□□□ -0.47
CLN6-219ENST00000637329 ASPHD1Q5U4P2 390 aa12.12□□□□□ -0.47
CLN6-219ENST00000637329 Q6YL49 198 aa12.12□□□□□ -0.47
CLN6-219ENST00000637329 BCL6BQ8N143 479 aaPredicted RBP12.12□□□□□ -0.47
CLN6-219ENST00000637329 RSG1Q9BU20 258 aa12.12□□□□□ -0.47
CLN6-219ENST00000637329 PARP11Q9NR21 331 aa12.12□□□□□ -0.47
CLN6-219ENST00000637329 ZNF580Q9UK33 172 aa12.12□□□□□ -0.47
CLN6-219ENST00000637329 VPREB3Q9UKI3 123 aa12.12□□□□□ -0.47
CLN6-219ENST00000637329 SOX21Q9Y651 276 aaPredicted RBP12.12□□□□□ -0.47
CLN6-219ENST00000637329 CSPG4Q6UVK1 2322 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 JMJD1CQ15652 2540 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 MBP02144 154 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 AMY1AP04745 511 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 EGR2P11161 476 aaPredicted RBP12.11□□□□□ -0.47
CLN6-219ENST00000637329 DEFA4P12838 97 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 MFAP2P55001 183 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 GAMTQ14353 236 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 LY6EQ16553 131 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 KLK9Q2XQG4 91 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 FAM110DQ8TAY7 271 aaPredicted RBP12.11□□□□□ -0.47
CLN6-219ENST00000637329 FAM103A1Q9BTL3 118 aaKnown RBP12.11□□□□□ -0.47
CLN6-219ENST00000637329 WNT10AQ9GZT5 417 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 KLK9Q9UKQ9 250 aa12.11□□□□□ -0.47
CLN6-219ENST00000637329 FLNAP21333 2647 aaKnown RBP12.11□□□□□ -0.47
CLN6-219ENST00000637329 NUDT19A8MXV4 375 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 IGHV4-59P01825 116 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 IGHG2P01859 326 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 PRH1P02810 166 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 APELAP0DMC3 54 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 HIST1H1BP16401 226 aaKnown RBP12.1□□□□□ -0.47
CLN6-219ENST00000637329 CAMLGP49069 296 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 AKIRIN2Q53H80 203 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 TMEM41BQ5BJD5 291 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 PRIMA1Q86XR5 153 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 TMEM86BQ8N661 226 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 TMEM116Q8NCL8 245 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 MISP3Q96FF7 219 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 MGST2Q99735 147 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 GGTLC1Q9BX51 225 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms