RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 SEC14L6B5MCN3 397 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 RRHO14718 337 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 CT45A6P0DMU7 189 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 CT45A5P0DMU8 189 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 CT45A7P0DMV0 189 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 SLC25A16P16260 332 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 PRTN3P24158 256 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 RELBQ01201 579 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 BSXQ3C1V8 233 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 LRRC75A-AS1Q8N1F1 130 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 OR4F5Q8NH21 305 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 ZNF596Q8TC21 504 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 Q96MF0 132 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 OR4F4Q96R69 305 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 MRPL20Q9BYC9 149 aaKnown RBP12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 MANBALQ9NQG1 85 aa12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 GAR1Q9NY12 217 aaKnown RBP12.4□□□□□ -0.42
CHRNA7-217ENST00000636603 CR1P17927 2039 aa12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 TOX4O94842 621 aa12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 IGLV1-47P01700 117 aa12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 S100PP25815 95 aa12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 CD1BP29016 333 aa12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 HLA-DRB5Q30154 266 aa12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 LINC00311Q8N616 119 aa12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 OR51G1Q8NGK1 321 aa12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 MBD6Q96DN6 1003 aa12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 TBX15Q96SF7 602 aa12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 GAB2Q9UQC2 676 aa12.39□□□□□ -0.43
CHRNA7-217ENST00000636603 RBFOX2O43251 390 aaKnown RBP eCLIP12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 HOXB4P17483 251 aaPredicted RBP12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 SPCS3P61009 180 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 ZNF833PQ6ZTB9 187 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 OR4P4Q8NGL7 312 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 OR4X1Q8NH49 305 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 ST6GALNAC6Q969X2 333 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 S1PR3Q99500 378 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 ELOVL1Q9BW60 279 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 INSIG2Q9Y5U4 225 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 TNCP24821 2201 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 ZFHX3Q15911 3703 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 CDC34P49427 236 aaPredicted RBP12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 PRRX1P54821 245 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 TREML4Q6UXN2 200 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 LHFPL4Q7Z7J7 247 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 KIR3DL3Q8N743 410 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 ZNF709Q8N972 641 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 C8orf31Q8N9H6 132 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 OR52E5Q8NH55 327 aa12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 POLR3KQ9Y2Y1 108 aaPredicted RBP12.38□□□□□ -0.43
CHRNA7-217ENST00000636603 BUB1B-PAK6H3BSN5 160 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 TMEM249Q2WGJ8 235 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 PDZD11Q5EBL8 140 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 WFDC11Q8NEX6 87 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 OR10D4PQ8NGN7 298 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 ABCA1O95477 2261 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 NOTCH2Q04721 2471 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 ELOA3CA0A087WX78 387 aaPredicted RBP12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 IGHV3-72A0A0B4J1Y9 119 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 C17orf112F2Z3M2 114 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 TGOLN2O43493 480 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 MSMBP08118 114 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 C1orf122Q6ZSJ8 110 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 NECAP1Q8NC96 275 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 MGST2Q99735 147 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 SRD5A3Q9H8P0 318 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 TMEM140Q9NV12 185 aa12.37□□□□□ -0.43
CHRNA7-217ENST00000636603 CSPG4Q6UVK1 2322 aa12.36□□□□□ -0.43
CHRNA7-217ENST00000636603 IGHV3OR16-10A0A075B7F0 116 aa12.36□□□□□ -0.43
CHRNA7-217ENST00000636603 IGKV1-16P04430 117 aa12.36□□□□□ -0.43
CHRNA7-217ENST00000636603 ATP5G3P48201 142 aa12.36□□□□□ -0.43
CHRNA7-217ENST00000636603 GNB1P62873 340 aa12.36□□□□□ -0.43
CHRNA7-217ENST00000636603 BEND2Q8NDZ0 799 aa12.36□□□□□ -0.43
CHRNA7-217ENST00000636603 OR11H6Q8NGC7 330 aa12.36□□□□□ -0.43
CHRNA7-217ENST00000636603 OR4A16Q8NH70 328 aa12.36□□□□□ -0.43
CHRNA7-217ENST00000636603 TMEM186Q96B77 213 aa12.36□□□□□ -0.43
CHRNA7-217ENST00000636603 ITPR3Q14573 2671 aa12.36□□□□□ -0.43
CHRNA7-217ENST00000636603 CREBBPQ92793 2442 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 C11orf94C9JXX5 98 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 PPP1R2P9O14990 202 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 THBS3P49746 956 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 PAX8Q06710 450 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 HILPDAQ9Y5L2 63 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 AKAP9Q99996 3911 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 SMCO3A2RU48 225 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 IFNA10P01566 189 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 S100A2P29034 98 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 GALR1P47211 349 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 ZNF137PP52743 207 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 TGIF2LXQ8IUE1 241 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 NABP2Q9BQ15 211 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 DERL1Q9BUN8 251 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 GGTLC1Q9BX51 225 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 HEYLQ9NQ87 328 aaPredicted RBP12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 HIF1ANQ9NWT6 349 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 TCF19Q9Y242 345 aa12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 LSM4Q9Y4Z0 139 aaKnown RBP12.35□□□□□ -0.43
CHRNA7-217ENST00000636603 TRAV20A0A0B4J274 112 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms