RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 TOMM40O96008 361 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 CD28P10747 220 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 TBR1Q16650 682 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 ATP1A1-AS1Q5TC04 95 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 FAM90A2PQ658T7 463 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 OR4D11Q8NGI4 311 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 OR5A1Q8NGJ0 315 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 V9GYH0 126 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 TRAV40A0A0B4J280 105 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 MSGN1A6NI15 193 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 IGKV1D-16P01601 117 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 APOC4P55056 127 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 SS18Q15532 418 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 PEAR1Q5VY43 1037 aaPredicted RBP5.31□□□□□ -1.56
GABRB3-218ENST00000635994 LCN12Q6JVE5 192 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 C9orf139Q6ZV77 190 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 ZNRF1Q8ND25 227 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 RNF125Q96EQ8 232 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 IGHV3OR16-13A0A075B7E8 117 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 IGHV3-74A0A0B4J1X5 117 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 PSPNO60542 156 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 NTN1O95631 604 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 C3orf36Q3SXR2 165 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 ZNF506Q5JVG8 444 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 TMEM144Q7Z5S9 345 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 ST6GAL2Q96JF0 529 aa5.31□□□□□ -1.56
GABRB3-218ENST00000635994 TRBV5-7A0A0A0MS05 114 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 IGHV3-35A0A0C4DH35 117 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 C12orf77C9JDV5 145 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 LINC00158P58513 81 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 PAX2Q02962 417 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 ATXN8Q156A1 80 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 CENPWQ5EE01 88 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 FAM216BQ8N7L0 139 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 WDYHV1Q96HA8 205 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 PTPRFP10586 1907 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 LOC102724200A0A096LPH7 203 aaPredicted RBP5.3□□□□□ -1.56
GABRB3-218ENST00000635994 TRBV5-3A0A0A0MS03 114 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 RUNX1Q01196 453 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 GTF3AQ92664 365 aaKnown RBP5.3□□□□□ -1.56
GABRB3-218ENST00000635994 PLEKHB2Q96CS7 222 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 C1QTNF5Q9BXJ0 243 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 SMPXQ9UHP9 88 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 A0A1B0GVG6 124 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 RCC1P18754 421 aaPredicted RBP5.3□□□□□ -1.56
GABRB3-218ENST00000635994 RCHY1Q96PM5 261 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 FOXC2Q99958 501 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 MRPL20Q9BYC9 149 aaKnown RBP5.3□□□□□ -1.56
GABRB3-218ENST00000635994 PRR13Q9NZ81 148 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 TRBV7-1A0A0A6YYK4 115 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.3□□□□□ -1.56
GABRB3-218ENST00000635994 FAM223BA6NKX1 122 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 LGALS1P09382 135 aaKnown RBP5.3□□□□□ -1.56
GABRB3-218ENST00000635994 SMIM10L1P0DMW3 83 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 IL11P20809 199 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 P2RY4P51582 365 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 IFITM2Q01629 132 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 SRSF6Q13247 344 aaKnown RBP5.3□□□□□ -1.56
GABRB3-218ENST00000635994 SNAI3Q3KNW1 292 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 SIGLEC15Q6ZMC9 328 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 FAM223AQ8IWN6 122 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 DLX4Q92988 240 aaPredicted RBP5.3□□□□□ -1.56
GABRB3-218ENST00000635994 SMIM10Q96HG1 83 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 AURKAIP1Q9NWT8 199 aaPredicted RBP5.3□□□□□ -1.56
GABRB3-218ENST00000635994 TTC3P53804 2025 aa5.3□□□□□ -1.56
GABRB3-218ENST00000635994 IGHV3-49A0A0A0MS15 119 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 TMEM238C9JI98 176 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 PSG1P11464 419 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 LIMS1P48059 325 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 INSL4Q14641 139 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 IRF3Q14653 427 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 ZNF585BQ52M93 769 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 NCMAPQ5T1S8 102 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 XAF1Q6GPH4 301 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 PCM1Q15154 2024 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 PGPEP1LA6NFU8 196 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 SRSF4Q08170 494 aaKnown RBP5.29□□□□□ -1.56
GABRB3-218ENST00000635994 FAM89BQ8N5H3 189 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 LEAP2Q969E1 77 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 Q9H3A6 140 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 CHCHD2Q9Y6H1 151 aaPredicted RBP5.29□□□□□ -1.56
GABRB3-218ENST00000635994 TDRD15B5MCY1 1934 aaKnown RBP5.29□□□□□ -1.56
GABRB3-218ENST00000635994 VWC2LB2RUY7 222 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 J3QLI3 93 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 LHBP01229 141 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 IGHV1-2P23083 117 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 MSRB2Q9Y3D2 182 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 KLF12Q9Y4X4 402 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 ZNHIT1O43257 154 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 GCM2O75603 506 aaPredicted RBP5.29□□□□□ -1.56
GABRB3-218ENST00000635994 LINC00271P0C7V0 271 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 SAA1P0DJI8 122 aaPredicted RBP5.29□□□□□ -1.56
GABRB3-218ENST00000635994 CT83Q5H943 113 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 ISOC2Q96AB3 205 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 SPAG8Q99932 426 aaPredicted RBP5.29□□□□□ -1.56
GABRB3-218ENST00000635994 TM2D1Q9BX74 207 aa5.29□□□□□ -1.56
GABRB3-218ENST00000635994 ZNF646O15015 1829 aaPredicted RBP5.29□□□□□ -1.56
GABRB3-218ENST00000635994 IGHV3-66A0A0C4DH42 116 aa5.28□□□□□ -1.56
GABRB3-218ENST00000635994 TMEM14DPA8MWL7 114 aa5.28□□□□□ -1.56
GABRB3-218ENST00000635994 RHODO00212 210 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms