RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, human

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PATJ-215	ENST00000635137		Q96MF0	132 aa		10.05	□□□□□ -0.8
PATJ-215	ENST00000635137	SRSF8	Q9BRL6	282 aa	Known RBP	10.05	□□□□□ -0.8
PATJ-215	ENST00000635137	TMEM147	Q9BVK8	224 aa		10.05	□□□□□ -0.8
PATJ-215	ENST00000635137	EIF5A2	Q9GZV4	153 aa	Known RBP	10.05	□□□□□ -0.8
PATJ-215	ENST00000635137	FBXO7	Q9Y3I1	522 aa		10.05	□□□□□ -0.8
PATJ-215	ENST00000635137	ABCA2	Q9BZC7	2435 aa		10.05	□□□□□ -0.8
PATJ-215	ENST00000635137	NAV2	Q8IVL1	2488 aa		10.05	□□□□□ -0.8
PATJ-215	ENST00000635137	TRAV40	A0A0B4J280	105 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	C15orf62	A8K5M9	175 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	TGFA	P01135	160 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	OR13C7	P0DN81	318 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	RPL27A	P46776	148 aa	Known RBP	10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	TNXA	Q16473	311 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	C1QL4	Q86Z23	238 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	SH3BGRL3	Q9H299	93 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	ASH1L	Q9NR48	2969 aa	Known RBP	10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	PMS2P5	A8MQ11	134 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	OPN1MW	P04001	364 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	OPN1MW2	P0DN77	364 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	OPN1MW3	P0DN78	364 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	TMEM11	P17152	192 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	DEFA6	Q01524	100 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	KIAA0141	Q14154	515 aa	Predicted RBP	10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	HNF4G	Q14541	408 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	C2orf83	Q53S99	150 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	PIP4P2	Q8N4L2	257 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	HSD17B11	Q8NBQ5	300 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	MEGF9	Q9H1U4	602 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	FBXL15	Q9H469	300 aa		10.04	□□□□□ -0.8
PATJ-215	ENST00000635137	CXorf65	A6NEN9	183 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	CDX1	P47902	265 aa	Predicted RBP	10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	RHEB	Q15382	184 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	TMEM249	Q2WGJ8	235 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	GFI1B	Q5VTD9	330 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	SPNS3	Q6ZMD2	512 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	DYNAP	Q8N1N2	210 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	DOK5	Q9P104	306 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	GCN1	Q92616	2671 aa	Known RBP	10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	NCBP2L	A6PVI3	153 aa	Known RBP	10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	ZNF727	A8MUV8	499 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	FNDC10	F2Z333	226 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	CNIH1	O95406	144 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	CA2	P00918	260 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	CNTFR	P26992	372 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	RPS10	P46783	165 aa	Known RBP	10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	DLK1	P80370	383 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	ARL16	Q0P5N6	197 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	LRRC75B	Q2VPJ9	315 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	ZNF343	Q6P1L6	599 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	HAPLN4	Q86UW8	402 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137		Q8N6K4	173 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	AJUBA	Q96IF1	538 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	RARRES2	Q99969	163 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	RFNG	Q9Y644	331 aa		10.03	□□□□□ -0.8
PATJ-215	ENST00000635137	SOX15	O60248	233 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	MPDU1	O75352	247 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	OR2C1	O95371	312 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	NDUFA6	P56556	154 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	SST	P61278	116 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	C5orf64	Q2M2E5	130 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	CYB5R2	Q6BCY4	276 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	TEX29	Q8N6K0	151 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	FOXC2	Q99958	501 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	PSMG3	Q9BT73	122 aa	Predicted RBP	10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	CXCL1	P09341	107 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	MYOD1	P15172	320 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	ATP6V0C	P27449	155 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	SERF2	P84101	59 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	VWC2	Q2TAL6	325 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	BSX	Q3C1V8	233 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	OR2G3	Q8NGZ4	309 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	RBMXL1	Q96E39	390 aa	Known RBP	10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	WDR61	Q9GZS3	305 aa	Known RBP	10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	SLC35B3	Q9H1N7	401 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	NPVF	Q9HCQ7	196 aa		10.02	□□□□□ -0.81
PATJ-215	ENST00000635137	APC	P25054	2843 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	VPS13C	Q709C8	3753 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	C17orf112	F2Z3M2	114 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	IGHV4-31	P0DP07	118 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	CAMLG	P49069	296 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	GNB1	P62873	340 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	PDZD11	Q5EBL8	140 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	ZNF562	Q6V9R5	426 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	ZNF709	Q8N972	641 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	OR10W1	Q8NGF6	305 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	OR10D4P	Q8NGN7	298 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	CACNG8	Q8WXS5	425 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	TAF15	Q92804	592 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	TPSG1	Q9NRR2	321 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	TIMM9	Q9Y5J7	89 aa		10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	FASN	P49327	2511 aa	Known RBP	10.01	□□□□□ -0.81
PATJ-215	ENST00000635137	CORT	O00230	105 aa		10	□□□□□ -0.81
PATJ-215	ENST00000635137	CD24	P25063	80 aa		10	□□□□□ -0.81
PATJ-215	ENST00000635137	CCL20	P78556	96 aa		10	□□□□□ -0.81
PATJ-215	ENST00000635137	RAB31	Q13636	194 aa		10	□□□□□ -0.81
PATJ-215	ENST00000635137	MRGPRG-AS1	Q2M3A8	158 aa		10	□□□□□ -0.81
PATJ-215	ENST00000635137	OR1L6	Q8NGR2	347 aa		10	□□□□□ -0.81
PATJ-215	ENST00000635137		Q8WTZ3	238 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms