RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 IL17RELQ6ZVW7 336 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 OR5R1Q8NH85 324 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 SGMS2Q8NHU3 365 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 RNF141Q8WVD5 230 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 CACNG8Q8WXS5 425 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 RSG1Q9BU20 258 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 WNT10AQ9GZT5 417 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 YAE1D1Q9NRH1 226 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 DMRT1Q9Y5R6 373 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 ZFHX3Q15911 3703 aa19.65■□□□□ 0.74
CAPNS1-215ENST00000628018 MYO9AB2RTY4 2548 aa19.64■□□□□ 0.73
CAPNS1-215ENST00000628018 SMCO3A2RU48 225 aa19.64■□□□□ 0.73
CAPNS1-215ENST00000628018 NMBP08949 121 aa19.64■□□□□ 0.73
CAPNS1-215ENST00000628018 FGF7P21781 194 aa19.64■□□□□ 0.73
CAPNS1-215ENST00000628018 SULT1A2P50226 295 aa19.64■□□□□ 0.73
CAPNS1-215ENST00000628018 MLANAQ16655 118 aa19.64■□□□□ 0.73
CAPNS1-215ENST00000628018 TTC9CQ8N5M4 171 aa19.64■□□□□ 0.73
CAPNS1-215ENST00000628018 OR2G3Q8NGZ4 309 aa19.64■□□□□ 0.73
CAPNS1-215ENST00000628018 PSMG3Q9BT73 122 aaPredicted RBP19.64■□□□□ 0.73
CAPNS1-215ENST00000628018 BTNL8Q6UX41 500 aa19.63■□□□□ 0.73
CAPNS1-215ENST00000628018 CENPVQ7Z7K6 275 aaPredicted RBP19.63■□□□□ 0.73
CAPNS1-215ENST00000628018 LFNGQ8NES3 379 aa19.63■□□□□ 0.73
CAPNS1-215ENST00000628018 FNDC4Q9H6D8 234 aaPredicted RBP19.63■□□□□ 0.73
CAPNS1-215ENST00000628018 PARP11Q9NR21 331 aa19.63■□□□□ 0.73
CAPNS1-215ENST00000628018 CORTO00230 105 aa19.62■□□□□ 0.73
CAPNS1-215ENST00000628018 ATP6V0E1O15342 81 aa19.62■□□□□ 0.73
CAPNS1-215ENST00000628018 GAMTQ14353 236 aa19.62■□□□□ 0.73
CAPNS1-215ENST00000628018 SLC16A13Q7RTY0 426 aa19.62■□□□□ 0.73
CAPNS1-215ENST00000628018 OR1L6Q8NGR2 347 aa19.62■□□□□ 0.73
CAPNS1-215ENST00000628018 LRRC20Q8TCA0 184 aa19.62■□□□□ 0.73
CAPNS1-215ENST00000628018 LSM4Q9Y4Z0 139 aaKnown RBP19.62■□□□□ 0.73
CAPNS1-215ENST00000628018 TIMM9Q9Y5J7 89 aa19.62■□□□□ 0.73
CAPNS1-215ENST00000628018 LINC01548A6NM66 108 aa19.61■□□□□ 0.73
CAPNS1-215ENST00000628018 MPDU1O75352 247 aa19.61■□□□□ 0.73
CAPNS1-215ENST00000628018 OPRK1P41145 380 aa19.61■□□□□ 0.73
CAPNS1-215ENST00000628018 NPCDR1Q9BY65 106 aa19.61■□□□□ 0.73
CAPNS1-215ENST00000628018 TMEM182Q6ZP80 229 aaPredicted RBP19.61■□□□□ 0.73
CAPNS1-215ENST00000628018 MISP3Q96FF7 219 aa19.61■□□□□ 0.73
CAPNS1-215ENST00000628018 BTBD17A6NE02 478 aa19.6■□□□□ 0.73
CAPNS1-215ENST00000628018 DEFA4P12838 97 aa19.6■□□□□ 0.73
CAPNS1-215ENST00000628018 SRP14P37108 136 aaKnown RBP19.6■□□□□ 0.73
CAPNS1-215ENST00000628018 AKR1C1Q04828 323 aa19.6■□□□□ 0.73
CAPNS1-215ENST00000628018 TEPPQ6URK8 271 aa19.6■□□□□ 0.73
CAPNS1-215ENST00000628018 TMEM144Q7Z5S9 345 aa19.6■□□□□ 0.73
CAPNS1-215ENST00000628018 TMEM68Q96MH6 324 aa19.6■□□□□ 0.73
CAPNS1-215ENST00000628018 VPREB3Q9UKI3 123 aa19.6■□□□□ 0.73
CAPNS1-215ENST00000628018 UMAD1C9J7I0 102 aa19.59■□□□□ 0.73
CAPNS1-215ENST00000628018 RAB5CP51148 216 aa19.59■□□□□ 0.73
CAPNS1-215ENST00000628018 CRIP2P52943 208 aaPredicted RBP19.59■□□□□ 0.73
CAPNS1-215ENST00000628018 SERF2P84101 59 aa19.59■□□□□ 0.73
CAPNS1-215ENST00000628018 ETFRF1Q6IPR1 90 aa19.59■□□□□ 0.73
CAPNS1-215ENST00000628018 OR2T6Q8NHC8 308 aa19.59■□□□□ 0.73
CAPNS1-215ENST00000628018 SLC35E1Q96K37 410 aa19.59■□□□□ 0.73
CAPNS1-215ENST00000628018 MGST2Q99735 147 aa19.59■□□□□ 0.73
CAPNS1-215ENST00000628018 OTOGQ6ZRI0 2925 aa19.58■□□□□ 0.73
CAPNS1-215ENST00000628018 HOXA3O43365 443 aaPredicted RBP19.58■□□□□ 0.73
CAPNS1-215ENST00000628018 IGHG2P01859 326 aa19.58■□□□□ 0.73
CAPNS1-215ENST00000628018 BLCAPP62952 87 aa19.58■□□□□ 0.73
CAPNS1-215ENST00000628018 NDUFA5Q16718 116 aa19.58■□□□□ 0.73
CAPNS1-215ENST00000628018 AKIRIN2Q53H80 203 aa19.58■□□□□ 0.73
CAPNS1-215ENST00000628018 UNQ5815/PRO19632Q6UWF5 114 aa19.58■□□□□ 0.73
CAPNS1-215ENST00000628018 TMEM160Q9NX00 188 aa19.58■□□□□ 0.73
CAPNS1-215ENST00000628018 NOTCH2Q04721 2471 aa19.58■□□□□ 0.72
CAPNS1-215ENST00000628018 MXRA5Q9NR99 2828 aa19.57■□□□□ 0.72
CAPNS1-215ENST00000628018 ZNF705EA8MWA4 302 aaPredicted RBP19.57■□□□□ 0.72
CAPNS1-215ENST00000628018 C17orf112F2Z3M2 114 aa19.57■□□□□ 0.72
CAPNS1-215ENST00000628018 SIGLECL1Q8N7X8 197 aa19.57■□□□□ 0.72
CAPNS1-215ENST00000628018 ZNF709Q8N972 641 aa19.57■□□□□ 0.72
CAPNS1-215ENST00000628018 OR5T1Q8NG75 326 aa19.57■□□□□ 0.72
CAPNS1-215ENST00000628018 FAM110DQ8TAY7 271 aaPredicted RBP19.57■□□□□ 0.72
CAPNS1-215ENST00000628018 SAT2Q96F10 170 aaPredicted RBP19.57■□□□□ 0.72
CAPNS1-215ENST00000628018 FANCD2OSQ96PS1 177 aa19.57■□□□□ 0.72
CAPNS1-215ENST00000628018 TMUB1Q9BVT8 246 aa19.57■□□□□ 0.72
CAPNS1-215ENST00000628018 IGLV11-55A0A075B6I3 123 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 IGKV1OR2-108A0A075B7D4 117 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 TRIM77I1YAP6 450 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 I3L2K1 104 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 TSPAN9O75954 239 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 MT-CO2P00403 227 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 PRH1P02810 166 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 HNF1AP20823 631 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 ECSCRQ19T08 205 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 C9orf152Q5JTZ5 239 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 MRPL36Q9P0J6 103 aaKnown RBP19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 TLN2Q9Y4G6 2542 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 SETXQ7Z333 2677 aaKnown RBP19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 ACANP16112 2415 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 IGF1P05019 195 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 CAMLGP49069 296 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 KLK9Q2XQG4 91 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 C19orf54Q5BKX5 351 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 ACY3Q96HD9 319 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 CXorf58Q96LI9 332 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 SMR3AQ99954 134 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 GGTLC1Q9BX51 225 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 TNFRSF19Q9NS68 423 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 KLK9Q9UKQ9 250 aa19.56■□□□□ 0.72
CAPNS1-215ENST00000628018 LINC00862A6NCI5 91 aa19.55■□□□□ 0.72
CAPNS1-215ENST00000628018 G3V318 75 aa19.55■□□□□ 0.72
CAPNS1-215ENST00000628018 AGPAT2O15120 278 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms