RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 TIMM23O14925 209 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 HTR1DP28221 377 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 OR10J1P30954 320 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 OR4F5Q8NH21 305 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 OR4F4Q96R69 305 aa15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 FNDC4Q9H6D8 234 aaPredicted RBP15.76■□□□□ 0.11
CHRNA4-209ENST00000627000 IGHV3-48P01763 117 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 ARL14EPLP0DKL9 152 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 PRTN3P24158 256 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 UBE2G2P60604 165 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 C19orf35Q6ZS72 473 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 SLC16A13Q7RTY0 426 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 MMD2Q8IY49 270 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 FBXL15Q9H469 300 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 STAG3L2P0CL84 134 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 STAG3L3P0CL85 134 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 S100PP25815 95 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 GNB1P62873 340 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 ACY3Q96HD9 319 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 DPM3Q9P2X0 92 aa15.75■□□□□ 0.11
CHRNA4-209ENST00000627000 IGLC7A0M8Q6 106 aa15.74■□□□□ 0.11
CHRNA4-209ENST00000627000 RPL27AP46776 148 aaKnown RBP15.74■□□□□ 0.11
CHRNA4-209ENST00000627000 SSBP2P81877 361 aaPredicted RBP15.74■□□□□ 0.11
CHRNA4-209ENST00000627000 ZNF674Q2M3X9 581 aa15.74■□□□□ 0.11
CHRNA4-209ENST00000627000 MED13LQ71F56 2210 aa15.74■□□□□ 0.11
CHRNA4-209ENST00000627000 CACNA1BQ00975 2339 aa15.74■□□□□ 0.11
CHRNA4-209ENST00000627000 ODF3BA8MYP8 253 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 ACTL6BO94805 426 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 IGHV2-5P01817 119 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 AREGP15514 252 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 SPNS3Q6ZMD2 512 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 PPP1R27Q86WC6 154 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 FAM24BQ8N5W8 94 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 RPUSD4Q96CM3 377 aaKnown RBP15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 FCN1O00602 326 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 RNF224P0DH78 156 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 CD24P25063 80 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 LCN2P80188 198 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 TMEM249Q2WGJ8 235 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 VMO1Q7Z5L0 202 aa15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 MRPL36Q9P0J6 103 aaKnown RBP15.73■□□□□ 0.11
CHRNA4-209ENST00000627000 FOXH1O75593 365 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 VENTXO95231 258 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 GPX4P36969 197 aaPredicted RBP15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 ATP5G3P48201 142 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 FBLN7Q53RD9 439 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 CACNG8Q8WXS5 425 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 MALSU1Q96EH3 234 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 SLC35E1Q96K37 410 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 BPESC1Q9GZL8 116 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 OR51M1Q9H341 326 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 SDF2L1Q9HCN8 221 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 ASH1LQ9NR48 2969 aaKnown RBP15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 C11orf94C9JXX5 98 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 OR2C1O95371 312 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 COMPP49747 757 aaPredicted RBP15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 MFAP2P55001 183 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 RHOBP62745 196 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 KIAA0141Q14154 515 aaPredicted RBP15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 RNASEH2CQ8TDP1 164 aaKnown RBP15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 CFHR4Q92496 578 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 SMIM7Q9BQ49 75 aa15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 SPTAN1Q13813 2472 aaKnown RBP15.72■□□□□ 0.11
CHRNA4-209ENST00000627000 WNK2Q9Y3S1 2297 aa15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 TMEM250H0YL14 139 aa15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 OVOL3O00110 214 aa15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 CXorf1O96002 111 aa15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 NPPCP23582 126 aa15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 SUB1P53999 127 aaKnown RBP eCLIP15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 FAM78BQ5VT40 261 aa15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 RUSC1-AS1Q66K80 236 aa15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 MIR17HGQ75NE6 70 aa15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 PARLQ9H300 379 aa15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 NIT2Q9NQR4 276 aa15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 GSN-AS1Q9NRJ2 163 aa15.71■□□□□ 0.11
CHRNA4-209ENST00000627000 PRB1P04280 392 aa15.7■□□□□ 0.1
CHRNA4-209ENST00000627000 RAB5AP20339 215 aa15.7■□□□□ 0.1
CHRNA4-209ENST00000627000 CST9LP1Q5W188 147 aa15.7■□□□□ 0.1
CHRNA4-209ENST00000627000 LGALS4P56470 323 aa15.7■□□□□ 0.1
CHRNA4-209ENST00000627000 FABP9Q0Z7S8 132 aa15.7■□□□□ 0.1
CHRNA4-209ENST00000627000 DYNAPQ8N1N2 210 aa15.7■□□□□ 0.1
CHRNA4-209ENST00000627000 OR51G1Q8NGK1 321 aa15.7■□□□□ 0.1
CHRNA4-209ENST00000627000 NPIPB3Q92617 1050 aa15.7■□□□□ 0.1
CHRNA4-209ENST00000627000 YPEL4Q96NS1 127 aa15.7■□□□□ 0.1
CHRNA4-209ENST00000627000 USP24Q9UPU5 2620 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 A0A087WWC5 75 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 LINC00587B1AMM8 73 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 TEX22C9J3V5 150 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 HOXB4P17483 251 aaPredicted RBP15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 PAX2Q02962 417 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 PLGLAQ15195 96 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 MMDQ15546 238 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 SSX2Q16385 188 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 COL12A1Q99715 3063 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 IGHV4-39P01824 125 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 GCHFRP30047 84 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 MAS1LP35410 378 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 CEACAM3P40198 252 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 LMO4P61968 165 aa15.69■□□□□ 0.1
CHRNA4-209ENST00000627000 ZNF343Q6P1L6 599 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms