RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 FGF2P09038 288 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 PSMB8P28062 276 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 RPL12P30050 165 aaKnown RBP9.85□□□□□ -0.83
PNKP-217ENST00000625216 PPIFP30405 207 aaKnown RBP9.85□□□□□ -0.83
PNKP-217ENST00000625216 HOXA1P49639 335 aaPredicted RBP9.85□□□□□ -0.83
PNKP-217ENST00000625216 PRCDQ00LT1 54 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 EWSR1Q01844 656 aaKnown RBP eCLIP9.85□□□□□ -0.83
PNKP-217ENST00000625216 TMEM267Q0VDI3 215 aaPredicted RBP9.85□□□□□ -0.83
PNKP-217ENST00000625216 OR2F1Q13607 317 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 TNXAQ16473 311 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 C18orf65Q6ZTR6 163 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 TMUB2Q71RG4 321 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 PPP1R27Q86WC6 154 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 MMD2Q8IY49 270 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 OR2C3Q8N628 320 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 TMEM252Q8N6L7 170 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 OR5B3Q8NH48 314 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 SMIM8Q96KF7 97 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 CLCC1Q96S66 551 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 ARL6Q9H0F7 186 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 PSENENQ9NZ42 101 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 WSB1Q9Y6I7 421 aa9.85□□□□□ -0.83
PNKP-217ENST00000625216 IGHV7-81A0A0B4J1V7 117 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 FCN1O00602 326 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 TSC22D2O75157 780 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 CA2P00918 260 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 CAV2P51636 162 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 TAS2R30P59541 319 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 EGFEM1PQ0D2K5 195 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 OPCMLQ14982 345 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 PLGLAQ15195 96 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 HAPLN4Q86UW8 402 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 INO80EQ8NBZ0 244 aaPredicted RBP9.84□□□□□ -0.83
PNKP-217ENST00000625216 OR1L8Q8NGR8 309 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 RAX2Q96IS3 184 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 HINT2Q9BX68 163 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 NDUFA4L2Q9NRX3 87 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 FKBP11Q9NYL4 201 aa9.84□□□□□ -0.83
PNKP-217ENST00000625216 TRAV41A0A0B4J266 112 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 A0A0D9SG52 128 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 C15orf62A8K5M9 175 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 ATP6V0E1O15342 81 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 BCL2L11O43521 198 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 IGLV1-40P01703 118 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 S100A11P31949 105 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 MAS1LP35410 378 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 NUP62P37198 522 aaPredicted RBP9.83□□□□□ -0.84
PNKP-217ENST00000625216 RPL27AP46776 148 aaKnown RBP9.83□□□□□ -0.84
PNKP-217ENST00000625216 CRIP2P52943 208 aaPredicted RBP9.83□□□□□ -0.84
PNKP-217ENST00000625216 NDPQ00604 133 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 SPANXN5Q5MJ07 72 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 TMEM14EPQ6UXP3 125 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 LCNL1Q6ZST4 164 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 OR10W1Q8NGF6 305 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 MYOZ3Q8TDC0 251 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 TMEM170AQ8WVE7 144 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 C4orf3Q8WVX3 66 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 UBE2E2Q96LR5 201 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 CIB3Q96Q77 187 aaPredicted RBP9.83□□□□□ -0.84
PNKP-217ENST00000625216 COMMD5Q9GZQ3 224 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 PLEKHA3Q9HB20 300 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 PARP11Q9NR21 331 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 FBXL17Q9UF56 701 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 CACFD1Q9UGQ2 172 aa9.83□□□□□ -0.84
PNKP-217ENST00000625216 TEX22C9J3V5 150 aa9.82□□□□□ -0.84
PNKP-217ENST00000625216 METTL15P1P0C7V9 234 aa9.82□□□□□ -0.84
PNKP-217ENST00000625216 GNB1P62873 340 aa9.82□□□□□ -0.84
PNKP-217ENST00000625216 CX3CL1P78423 397 aa9.82□□□□□ -0.84
PNKP-217ENST00000625216 RUNX1Q01196 453 aa9.82□□□□□ -0.84
PNKP-217ENST00000625216 NHLH2Q02577 135 aa9.82□□□□□ -0.84
PNKP-217ENST00000625216 ARL16Q0P5N6 197 aa9.82□□□□□ -0.84
PNKP-217ENST00000625216 ZNF562Q6V9R5 426 aa9.82□□□□□ -0.84
PNKP-217ENST00000625216 SRSF12Q8WXF0 261 aaKnown RBP9.82□□□□□ -0.84
PNKP-217ENST00000625216 SMIM3Q9BZL3 60 aa9.82□□□□□ -0.84
PNKP-217ENST00000625216 ZC4H2Q9NQZ6 224 aa9.82□□□□□ -0.84
PNKP-217ENST00000625216 IGLC7A0M8Q6 106 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 PMS2P5A8MQ11 134 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 INS-IGF2F8WCM5 200 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 G3V318 75 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 CST7O76096 145 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 RAB9AP51151 201 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 KRTAP10-11P60412 298 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 IFITM2Q01629 132 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 WT1-ASQ06250 92 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 ZNF491Q8N8L2 437 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 ARPC5LQ9BPX5 153 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 SLC25A31Q9H0C2 315 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 KLK15Q9H2R5 256 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 WFDC1Q9HC57 220 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 ENY2Q9NPA8 101 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 HEYLQ9NQ87 328 aaPredicted RBP9.81□□□□□ -0.84
PNKP-217ENST00000625216 CYTL1Q9NRR1 136 aa9.81□□□□□ -0.84
PNKP-217ENST00000625216 STRAPQ9Y3F4 350 aaKnown RBP9.81□□□□□ -0.84
PNKP-217ENST00000625216 A0A1W2PN81 502 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 KANTRA0A1W2PQU2 76 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 K7EIL1 84 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 ACTL6BO94805 426 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 LY86O95711 162 aa9.8□□□□□ -0.84
PNKP-217ENST00000625216 RNASE2P10153 161 aaKnown RBP9.8□□□□□ -0.84
PNKP-217ENST00000625216 AREGP15514 252 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms