RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 MISP3Q96FF7 219 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 GINS3Q9BRX5 216 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 GGACTQ9BVM4 153 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 WNT10AQ9GZT5 417 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 CDC42EP3Q9UKI2 254 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 TNCP24821 2201 aa8.39□□□□□ -1.07
CPNE3-212ENST00000621783 FNDC10F2Z333 226 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 CORTO00230 105 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 PRH1P02810 166 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 DEFA4P12838 97 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 ATP6V0CP27449 155 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 RUNX1Q01196 453 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 AKR1C1Q04828 323 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 CD69Q07108 199 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 C19orf54Q5BKX5 351 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 ALKAL2Q6UX46 152 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 Q71RC1 249 aaPredicted RBP8.38□□□□□ -1.07
CPNE3-212ENST00000621783 PHYHIPLQ96FC7 376 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 DUX5Q96PT3 197 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 PARD6GQ9BYG4 376 aaPredicted RBP8.38□□□□□ -1.07
CPNE3-212ENST00000621783 WDR61Q9GZS3 305 aaKnown RBP8.38□□□□□ -1.07
CPNE3-212ENST00000621783 SH3BGRL3Q9H299 93 aa8.38□□□□□ -1.07
CPNE3-212ENST00000621783 GSX1Q9H4S2 264 aaPredicted RBP8.38□□□□□ -1.07
CPNE3-212ENST00000621783 FNDC4Q9H6D8 234 aaPredicted RBP8.38□□□□□ -1.07
CPNE3-212ENST00000621783 FLNAP21333 2647 aaKnown RBP8.38□□□□□ -1.07
CPNE3-212ENST00000621783 IGLV11-55A0A075B6I3 123 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 TRAV41A0A0B4J266 112 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 G3V318 75 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 IFNA7P01567 189 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 IGF1P05019 195 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 MDKP21741 143 aaPredicted RBP8.37□□□□□ -1.07
CPNE3-212ENST00000621783 FGF7P21781 194 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 GPX4P36969 197 aaPredicted RBP8.37□□□□□ -1.07
CPNE3-212ENST00000621783 ZNF767PQ75MW2 155 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 OR5T1Q8NG75 326 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 OR1L6Q8NGR2 347 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 SCGB1C1Q8TD33 95 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 TMED6Q8WW62 240 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 TAF15Q92804 592 aaKnown RBP eCLIP8.37□□□□□ -1.07
CPNE3-212ENST00000621783 SLC35E1Q96K37 410 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 TMEM68Q96MH6 324 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 NPFFR1Q9GZQ6 430 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 ESM1Q9NQ30 184 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 UBQLN2Q9UHD9 624 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 WDR83OSQ9Y284 106 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 RFNGQ9Y644 331 aa8.37□□□□□ -1.07
CPNE3-212ENST00000621783 IGHV3-21A0A0B4J1V1 117 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 RPS10-NUDT3A0A1W2PQS6 291 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 INAFM1C9JVW0 142 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 I3L2K1 104 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 AP4M1O00189 453 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 MT-CO2P00403 227 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 SPP1P10451 314 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 MLANAQ16655 118 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 TMEM95Q3KNT9 176 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 AKIRIN2Q53H80 203 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 FAM74A1Q5RGS3 127 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 ETFRF1Q6IPR1 90 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 BTNL8Q6UX41 500 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 TREML4Q6UXN2 200 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 SCARB1Q8WTV0 552 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 CACNG8Q8WXS5 425 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 GNPNAT1Q96EK6 184 aaPredicted RBP8.36□□□□□ -1.07
CPNE3-212ENST00000621783 ACY3Q96HD9 319 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 FANCD2OSQ96PS1 177 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 RSG1Q9BU20 258 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 SLC25A32Q9H2D1 315 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 ZNF702PQ9H963 129 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 MRPL36Q9P0J6 103 aaKnown RBP8.36□□□□□ -1.07
CPNE3-212ENST00000621783 LINC00527Q9UJ94 153 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 ZNF580Q9UK33 172 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 PLXNB1O43157 2135 aa8.36□□□□□ -1.07
CPNE3-212ENST00000621783 MYO9AB2RTY4 2548 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 TRIM77I1YAP6 450 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 K7EIM0 57 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 CYB5BO43169 146 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 SOX15O60248 233 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 TSPAN9O75954 239 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 OR2J3O76001 311 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 IGHV3-48P01763 117 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 SEC11BP0C7V7 166 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 HIST1H1BP16401 226 aaKnown RBP8.35□□□□□ -1.07
CPNE3-212ENST00000621783 DEFA5Q01523 94 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 GAMTQ14353 236 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 EIF5AL1Q6IS14 154 aaKnown RBP8.35□□□□□ -1.07
CPNE3-212ENST00000621783 TMEM144Q7Z5S9 345 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 OR2T6Q8NHC8 308 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 NOL4LQ96MY1 436 aaPredicted RBP8.35□□□□□ -1.07
CPNE3-212ENST00000621783 MGST2Q99735 147 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 NPCDR1Q9BY65 106 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 PRSS22Q9GZN4 317 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 NPVFQ9HCQ7 196 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 LSM4Q9Y4Z0 139 aaKnown RBP8.35□□□□□ -1.07
CPNE3-212ENST00000621783 TIMM9Q9Y5J7 89 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 ZANQ9Y493 2812 aa8.35□□□□□ -1.07
CPNE3-212ENST00000621783 NAV3Q8IVL0 2385 aa8.34□□□□□ -1.07
CPNE3-212ENST00000621783 CLDN34H7C241 214 aa8.34□□□□□ -1.07
CPNE3-212ENST00000621783 MPDU1O75352 247 aa8.34□□□□□ -1.07
CPNE3-212ENST00000621783 NDUFB8O95169 186 aa8.34□□□□□ -1.07
CPNE3-212ENST00000621783 RND2P52198 227 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms