RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 GINS3Q9BRX5 216 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 TMUB1Q9BVT8 246 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 WDR61Q9GZS3 305 aaKnown RBP12.56□□□□□ -0.4
CBWD3-216ENST00000621396 HLA-DRB1P01911 266 aa12.55□□□□□ -0.4
CBWD3-216ENST00000621396 SRP14P37108 136 aaKnown RBP12.55□□□□□ -0.4
CBWD3-216ENST00000621396 SPP1P10451 314 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 FGF7P21781 194 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 TREML4Q6UXN2 200 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 OR2G3Q8NGZ4 309 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 SCGB1C1Q8TD33 95 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 ACY3Q96HD9 319 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 TMEM147Q9BVK8 224 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 ARV1Q9H2C2 271 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 RPS10-NUDT3A0A1W2PQS6 291 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 SIGLECL1Q8N7X8 197 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 CXorf58Q96LI9 332 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 NOL4LQ96MY1 436 aaPredicted RBP12.54□□□□□ -0.4
CBWD3-216ENST00000621396 VSIRQ9H7M9 311 aa12.54□□□□□ -0.4
CBWD3-216ENST00000621396 IGKV1OR2-108A0A075B7D4 117 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 CYSRT1A8MQ03 144 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 CTRB1P17538 263 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 AKR1C1Q04828 323 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 GAMTQ14353 236 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 TMEM95Q3KNT9 176 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 CTRB2Q6GPI1 263 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 BTNL8Q6UX41 500 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 Q6YL49 198 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 GSX1Q9H4S2 264 aaPredicted RBP12.53□□□□□ -0.4
CBWD3-216ENST00000621396 F11RQ9Y624 299 aaKnown RBP12.53□□□□□ -0.4
CBWD3-216ENST00000621396 A0A1B0GV50 99 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 INS-IGF2F8WCM5 200 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 NMBP08949 121 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 FAM157CP0CG43 387 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 ELLP55199 621 aaPredicted RBP12.53□□□□□ -0.4
CBWD3-216ENST00000621396 BPIFB3P59826 476 aa12.53□□□□□ -0.4
CBWD3-216ENST00000621396 SETD2Q9BYW2 2564 aaPredicted RBP12.52□□□□□ -0.4
CBWD3-216ENST00000621396 LY86O95711 162 aa12.52□□□□□ -0.4
CBWD3-216ENST00000621396 LY6G6DO95868 133 aa12.52□□□□□ -0.4
CBWD3-216ENST00000621396 UNQ5815/PRO19632Q6UWF5 114 aa12.52□□□□□ -0.4
CBWD3-216ENST00000621396 PHYHIPLQ96FC7 376 aa12.52□□□□□ -0.4
CBWD3-216ENST00000621396 NIPBLQ6KC79 2804 aaeCLIP12.52□□□□□ -0.41
CBWD3-216ENST00000621396 GATA2P23769 480 aaPredicted RBP12.52□□□□□ -0.41
CBWD3-216ENST00000621396 SUB1P53999 127 aaKnown RBP eCLIP12.52□□□□□ -0.41
CBWD3-216ENST00000621396 EIF5AP63241 154 aaKnown RBP12.52□□□□□ -0.41
CBWD3-216ENST00000621396 CD69Q07108 199 aa12.52□□□□□ -0.41
CBWD3-216ENST00000621396 C9orf139Q6ZV77 190 aa12.52□□□□□ -0.41
CBWD3-216ENST00000621396 OR1P1Q8NH06 330 aa12.52□□□□□ -0.41
CBWD3-216ENST00000621396 NPCDR1Q9BY65 106 aa12.52□□□□□ -0.41
CBWD3-216ENST00000621396 PITPNC1Q9UKF7 332 aa12.52□□□□□ -0.41
CBWD3-216ENST00000621396 ZNF705EA8MWA4 302 aaPredicted RBP12.51□□□□□ -0.41
CBWD3-216ENST00000621396 VWC2Q2TAL6 325 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 MGST2Q99735 147 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 FGF16O43320 207 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 MT-CO2P00403 227 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 IGHV3-23P01764 117 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 ATP6V1FQ16864 119 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 GCSAMLQ5JQS6 135 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 SLC16A13Q7RTY0 426 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 SGMS2Q8NHU3 365 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 NPIPB3Q92617 1050 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 MS4A10Q96PG2 267 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 NPVFQ9HCQ7 196 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 ZNF355PQ9NSJ1 428 aa12.51□□□□□ -0.41
CBWD3-216ENST00000621396 SOX15O60248 233 aa12.5□□□□□ -0.41
CBWD3-216ENST00000621396 SEC11BP0C7V7 166 aa12.5□□□□□ -0.41
CBWD3-216ENST00000621396 RAB14P61106 215 aa12.5□□□□□ -0.41
CBWD3-216ENST00000621396 FANCD2OSQ96PS1 177 aa12.5□□□□□ -0.41
CBWD3-216ENST00000621396 WDR83OSQ9Y284 106 aa12.5□□□□□ -0.41
CBWD3-216ENST00000621396 MDKP21741 143 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-216ENST00000621396 DLK1P80370 383 aa12.5□□□□□ -0.41
CBWD3-216ENST00000621396 ZNF114Q8NC26 417 aa12.5□□□□□ -0.41
CBWD3-216ENST00000621396 NSD1Q96L73 2696 aaPredicted RBP12.49□□□□□ -0.41
CBWD3-216ENST00000621396 OR2J3O76001 311 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 RND2P52198 227 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 AANATQ16613 207 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 MIC13Q5XKP0 118 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 ACSM6Q6P461 480 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 RNF141Q8WVD5 230 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 VPREB3Q9UKI3 123 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 BTBD17A6NE02 478 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 AGPAT2O15120 278 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 HMGB3O15347 200 aaKnown RBP12.49□□□□□ -0.41
CBWD3-216ENST00000621396 ZNF616Q08AN1 781 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 EIF5AL1Q6IS14 154 aaKnown RBP12.49□□□□□ -0.41
CBWD3-216ENST00000621396 TEPPQ6URK8 271 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 MRPL41Q8IXM3 137 aaKnown RBP12.49□□□□□ -0.41
CBWD3-216ENST00000621396 FAM213BQ8TBF2 198 aa12.49□□□□□ -0.41
CBWD3-216ENST00000621396 RNASEH2CQ8TDP1 164 aaKnown RBP12.49□□□□□ -0.41
CBWD3-216ENST00000621396 CAMLGP49069 296 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 ZNF90Q03938 601 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 CLLU1Q5K131 121 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 LCNL1Q6ZST4 164 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 SLC35E3Q7Z769 313 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 TTC9CQ8N5M4 171 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 GNPNAT1Q96EK6 184 aaPredicted RBP12.48□□□□□ -0.41
CBWD3-216ENST00000621396 LSM4Q9Y4Z0 139 aaKnown RBP12.48□□□□□ -0.41
CBWD3-216ENST00000621396 CRYGCP07315 174 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 SULT1A2P50226 295 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 Q6ZRG5 221 aa12.48□□□□□ -0.41
CBWD3-216ENST00000621396 HSD17B13Q7Z5P4 300 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms