RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 C1orf185Q5T7R7 199 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 RIPPLY2Q5TAB7 128 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 BHLHA15Q7RTS1 189 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-216ENST00000620854 OR4F17Q8NGA8 305 aa5.79□□□□□ -1.48
NEDD9-216ENST00000620854 NAV3Q8IVL0 2385 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 A0A1W2PN81 502 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 P01737 135 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 TYMSP04818 313 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 COLCA1Q6ZS62 124 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 CENPVQ7Z7K6 275 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-216ENST00000620854 FAM222BQ8WU58 562 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 C5orf30Q96GV9 206 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 RCHY1Q96PM5 261 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 SSBP3Q9BWW4 388 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-216ENST00000620854 NPVFQ9HCQ7 196 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 TP73-AS1Q9UF72 201 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 MGAQ8IWI9 3026 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 TRAV3A0A0B4J244 114 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 M0QZK8 103 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 PRSS1P07477 247 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 S100A7P31151 101 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 LHX2P50458 406 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 BRWD1-AS2P59051 145 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 Q0VFX4 171 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 COL5A1-AS1Q5SY13 56 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 HCP5Q6MZN7 132 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 Q6P435 159 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 UNQ5815/PRO19632Q6UWF5 114 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 MMD2Q8IY49 270 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 PRR7Q8TB68 274 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 ABHD17AQ96GS6 310 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 CCL13Q99616 98 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 YTHDF2Q9Y5A9 579 aaKnown RBP5.78□□□□□ -1.48
NEDD9-216ENST00000620854 SPENQ96T58 3664 aaKnown RBP5.78□□□□□ -1.48
NEDD9-216ENST00000620854 WNK1Q9H4A3 2382 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-216ENST00000620854 K7EN84 100 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 CCL21O00585 134 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 MLNRO43193 412 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 CGAP01215 116 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 OR9G9P0C7N8 305 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 CRYBB3P26998 211 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 FOXL1Q12952 345 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 PSG7Q13046 419 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 INO80CQ6PI98 192 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-216ENST00000620854 PQLC2Q6ZP29 291 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 WDR86Q86TI4 376 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 Q8NFD4 153 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 ST6GALNAC6Q969X2 333 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 GAL3ST2Q9H3Q3 398 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 MS4A5Q9H3V2 200 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 NRN1Q9NPD7 142 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 WIPI2Q9Y4P8 454 aa5.78□□□□□ -1.48
NEDD9-216ENST00000620854 PMS2P5A8MQ11 134 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 MYOD1P15172 320 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 SRIP30626 198 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 RELQ04864 619 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-216ENST00000620854 ZNF497Q6ZNH5 498 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 SSX8Q7RTT4 187 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 TMEM144Q7Z5S9 345 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 OR8A1Q8NGG7 326 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 TMEM191AQ9H0A3 160 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 IL19Q9UHD0 177 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 METRNQ9UJH8 293 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 TEX50A0A1B0GTY4 177 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 C15orf62A8K5M9 175 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 C16orf97H3BN30 126 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 APCSP02743 223 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 TDGF1P13385 188 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 ASCL5Q7RTU5 278 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 ZNF645Q8N7E2 425 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 C5orf17Q8NAS9 161 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 RNASE8Q8TDE3 154 aaKnown RBP5.77□□□□□ -1.49
NEDD9-216ENST00000620854 GSX1Q9H4S2 264 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-216ENST00000620854 SAP30LQ9HAJ7 183 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 MRPS18CQ9Y3D5 142 aaKnown RBP5.77□□□□□ -1.49
NEDD9-216ENST00000620854 RAB29O14966 203 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 LINC00869P0C866 280 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 PRB4P10163 310 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-216ENST00000620854 MPV17P39210 176 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 KRTAP27-1Q3LI81 207 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 C10orf113Q5VZT2 155 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 TREML4Q6UXN2 200 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 SAXO1Q8IYX7 474 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 PRSS33Q8NF86 280 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 ADTRPQ96IZ2 230 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 UFC1Q9Y3C8 167 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 OR51B2Q9Y5P1 312 aa5.77□□□□□ -1.49
NEDD9-216ENST00000620854 PIEZO2Q9H5I5 2752 aa5.76□□□□□ -1.49
NEDD9-216ENST00000620854 COL5A1P20908 1838 aaPredicted RBP5.76□□□□□ -1.49
NEDD9-216ENST00000620854 LOC389332A0A1B0GUA5 103 aa5.76□□□□□ -1.49
NEDD9-216ENST00000620854 CD40P25942 277 aa5.76□□□□□ -1.49
NEDD9-216ENST00000620854 NBL1P41271 181 aa5.76□□□□□ -1.49
NEDD9-216ENST00000620854 PAFAH1B2P68402 229 aa5.76□□□□□ -1.49
NEDD9-216ENST00000620854 RPL39P5Q59GN2 51 aa5.76□□□□□ -1.49
NEDD9-216ENST00000620854 ZBTB34Q8NCN2 500 aa5.76□□□□□ -1.49
NEDD9-216ENST00000620854 OR2V2Q96R30 315 aa5.76□□□□□ -1.49
NEDD9-216ENST00000620854 RNF7Q9UBF6 113 aa5.76□□□□□ -1.49
NEDD9-216ENST00000620854 SMPD2O60906 423 aa5.76□□□□□ -1.49
NEDD9-216ENST00000620854 IBA57Q5T440 356 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms