RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CLEC2LP0C7M8 214 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 PAX9P55771 341 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 CCL18P55774 89 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 ERVFC1-1P60608 527 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 WT1-ASQ06250 92 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 KIR3DS1Q14943 382 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 RCN1Q15293 331 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 C4orf46Q504U0 113 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 IGSF11Q5DX21 431 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 C19orf35Q6ZS72 473 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 NFE4Q86UQ8 179 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 FAM24BQ8N5W8 94 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 SLC24A4Q8NFF2 622 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 CCDC124Q96CT7 223 aaKnown RBP3.19□□□□□ -1.9
SNCA-213ENST00000618500 ARHGAP5-AS1Q96IT6 56 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 GINS4Q9BRT9 223 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 C8orf4Q9NR00 106 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 PLCXD1Q9NUJ7 323 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 KCNK7Q9Y2U2 307 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 FAT1Q14517 4588 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 TEX50A0A1B0GTY4 177 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 CORTO00230 105 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 EI24O14681 340 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 ST8SIA3O43173 380 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 PLA2G1BP04054 148 aaKnown RBP3.19□□□□□ -1.9
SNCA-213ENST00000618500 HIST1H1DP16402 221 aaKnown RBP3.19□□□□□ -1.9
SNCA-213ENST00000618500 RPL5P46777 297 aaKnown RBP3.19□□□□□ -1.9
SNCA-213ENST00000618500 USF2Q15853 346 aaPredicted RBP3.19□□□□□ -1.9
SNCA-213ENST00000618500 RAB11BQ15907 218 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 UBE2UQ5VVX9 321 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 LINC00612Q8N6U2 182 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 GLMPQ8WWB7 406 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 TMEM56Q96MV1 263 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 RAB40CQ96S21 281 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 COMMD5Q9GZQ3 224 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 CLEC5AQ9NY25 188 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 PRNDQ9UKY0 176 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 LINC00588Q9Y4M8 146 aa3.19□□□□□ -1.9
SNCA-213ENST00000618500 DNASE2O00115 360 aaPredicted RBP3.18□□□□□ -1.9
SNCA-213ENST00000618500 YIF1AO95070 293 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 WNT4P56705 351 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 MRPS15P82914 257 aaKnown RBP3.18□□□□□ -1.9
SNCA-213ENST00000618500 CATR1Q13166 79 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 TOMM20LQ6UXN7 152 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 OR10R2Q8NGX6 335 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 TCTEX1D2Q8WW35 142 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 GFI1Q99684 422 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 DCUN1D5Q9BTE7 237 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 SAV1Q9H4B6 383 aaPredicted RBP3.18□□□□□ -1.9
SNCA-213ENST00000618500 DAPK2Q9UIK4 370 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 GOLT1BQ9Y3E0 138 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 TNXBP22105 4242 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 GSTZ1O43708 216 aaPredicted RBP3.18□□□□□ -1.9
SNCA-213ENST00000618500 PSMB9P28065 219 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 HSPA13P48723 471 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 ACSM3Q53FZ2 586 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 Q56UQ5 140 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 HSP90B2PQ58FF3 399 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 CT83Q5H943 113 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 FAM222AQ5U5X8 452 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 ZFP1Q6P2D0 407 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 FOXI2Q6ZQN5 318 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 DEFB104AQ8WTQ1 72 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 RAB3CQ96E17 227 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 NARS2Q96I59 477 aaKnown RBP3.18□□□□□ -1.9
SNCA-213ENST00000618500 ATG101Q9BSB4 218 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 TMEM140Q9NV12 185 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 PLA2G2DQ9UNK4 145 aa3.18□□□□□ -1.9
SNCA-213ENST00000618500 TRAV30A0A087WSZ9 112 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 LOC100130705A0A1B0GUX0 176 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 CBY3A6NI87 242 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 BET1O15155 118 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 GADD45AP24522 165 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 PSMB3P49720 205 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 TOR2AQ5JU69 321 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 NANOGP1Q8N7R0 232 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 SLC25A46Q96AG3 418 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 ORAI1Q96D31 301 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 C20orf24Q9BUV8 137 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 C9orf16Q9BUW7 83 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 AGRNO00468 2067 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 GYG2O15488 501 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 RPA2P15927 270 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 ETV6P41212 452 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 P2RY1P47900 373 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 SNRPD3P62318 126 aaKnown RBP3.17□□□□□ -1.9
SNCA-213ENST00000618500 HSD17B12Q53GQ0 312 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 LEMD1Q68G75 181 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 ZNF709Q8N972 641 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 OR13F1Q8NGS4 319 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 METTL26Q96S19 204 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 TSC22D3Q99576 134 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 S4R3C0 116 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 TMEM272A0A1B0GTI8 110 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 PAX4O43316 350 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 DENRO43583 198 aaKnown RBP3.17□□□□□ -1.9
SNCA-213ENST00000618500 TOMM40O96008 361 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 HBE1P02100 147 aa3.17□□□□□ -1.9
SNCA-213ENST00000618500 NPPCP23582 126 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms