RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CMC4P56277 68 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC3-208ENST00000616074 HSPE1P61604 102 aaKnown RBP15.26■□□□□ 0.03
TRAPPC3-208ENST00000616074 SNX29P2Q8IUI4 249 aa15.26■□□□□ 0.03
TRAPPC3-208ENST00000616074 RPP25LQ8N5L8 163 aaKnown RBP15.26■□□□□ 0.03
TRAPPC3-208ENST00000616074 CMTM3Q96MX0 182 aa15.26■□□□□ 0.03
TRAPPC3-208ENST00000616074 SCPEP1Q9HB40 452 aa15.26■□□□□ 0.03
TRAPPC3-208ENST00000616074 VPS13DQ5THJ4 4388 aa15.26■□□□□ 0.03
TRAPPC3-208ENST00000616074 RCVRNP35243 200 aa15.25■□□□□ 0.03
TRAPPC3-208ENST00000616074 UCP3P55916 312 aa15.25■□□□□ 0.03
TRAPPC3-208ENST00000616074 IZUMO4Q1ZYL8 232 aa15.25■□□□□ 0.03
TRAPPC3-208ENST00000616074 SPINK9Q5DT21 86 aa15.25■□□□□ 0.03
TRAPPC3-208ENST00000616074 TCF24Q7RTU0 167 aa15.25■□□□□ 0.03
TRAPPC3-208ENST00000616074 GATAD1Q8WUU5 269 aa15.25■□□□□ 0.03
TRAPPC3-208ENST00000616074 RARRES2Q99969 163 aa15.25■□□□□ 0.03
TRAPPC3-208ENST00000616074 APOA1P02647 267 aa15.24■□□□□ 0.03
TRAPPC3-208ENST00000616074 APOHP02749 345 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC3-208ENST00000616074 ERHP84090 104 aaKnown RBP15.24■□□□□ 0.03
TRAPPC3-208ENST00000616074 TOMM20LQ6UXN7 152 aa15.24■□□□□ 0.03
TRAPPC3-208ENST00000616074 ST8SIA2Q92186 375 aa15.24■□□□□ 0.03
TRAPPC3-208ENST00000616074 GINS3Q9BRX5 216 aa15.24■□□□□ 0.03
TRAPPC3-208ENST00000616074 SMIM31A0A1B0GVY4 71 aa15.23■□□□□ 0.03
TRAPPC3-208ENST00000616074 M0QYG6 137 aa15.23■□□□□ 0.03
TRAPPC3-208ENST00000616074 NCS1P62166 190 aa15.23■□□□□ 0.03
TRAPPC3-208ENST00000616074 LILRB2Q8N423 598 aa15.23■□□□□ 0.03
TRAPPC3-208ENST00000616074 VSIRQ9H7M9 311 aa15.23■□□□□ 0.03
TRAPPC3-208ENST00000616074 VCX3AQ9NNX9 186 aa15.23■□□□□ 0.03
TRAPPC3-208ENST00000616074 A0A087WXM4 84 aa15.22■□□□□ 0.03
TRAPPC3-208ENST00000616074 DEDDO75618 318 aa15.22■□□□□ 0.03
TRAPPC3-208ENST00000616074 ELK1P19419 428 aa15.22■□□□□ 0.03
TRAPPC3-208ENST00000616074 NANOS2P60321 138 aaKnown RBP15.22■□□□□ 0.03
TRAPPC3-208ENST00000616074 PAFAH1B2P68402 229 aa15.22■□□□□ 0.03
TRAPPC3-208ENST00000616074 OR11H2Q8NH07 326 aa15.22■□□□□ 0.03
TRAPPC3-208ENST00000616074 C11orf68Q9H3H3 251 aaKnown RBP15.22■□□□□ 0.03
TRAPPC3-208ENST00000616074 ZFAND3Q9H8U3 227 aa15.22■□□□□ 0.03
TRAPPC3-208ENST00000616074 IGHV3-66A0A0C4DH42 116 aa15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 ST8SIA3O43173 380 aa15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 HPGDSO60760 199 aa15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 CA1P00915 261 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 IGKV1-5P01602 117 aa15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 PI3P19957 117 aa15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 NPBWR1P48145 328 aa15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 RND3P61587 244 aa15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 LGALS9CQ6DKI2 356 aa15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 DUSP18Q8NEJ0 188 aa15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 MS4A6AQ9H2W1 248 aa15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 PUS1Q9Y606 427 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRAPPC3-208ENST00000616074 DFFBO76075 338 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 CD5P06127 495 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 P0C879 139 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 VBP1P61758 197 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 RNASE12Q5GAN4 147 aaKnown RBP15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 LEMD1Q68G75 181 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 ZNF600Q6ZNG1 722 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 FAM24BQ8N5W8 94 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 SLC35G3Q8N808 338 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 C11orf45Q8TAV5 145 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 TP53RKQ96S44 253 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 FBXL17Q9UF56 701 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 DNAH6Q9C0G6 4158 aa15.2■□□□□ 0.02
TRAPPC3-208ENST00000616074 HERC2O95714 4834 aa15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 A0A0B4J293 547 aa15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 A0A1B0GU03 582 aa15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 INS-IGF2F8WCM5 200 aa15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 DNASE2O00115 360 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 PGAM2P15259 253 aa15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 SNCAP37840 140 aa15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 PIGPP57054 158 aa15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 DEFB131AP59861 70 aa15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 PVRIGQ6DKI7 326 aa15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 LHFPL1Q86WI0 220 aa15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 ZNF486Q96H40 463 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 FUNDC2Q9BWH2 189 aa15.19■□□□□ 0.02
TRAPPC3-208ENST00000616074 DEFB4AO15263 64 aa15.18■□□□□ 0.02
TRAPPC3-208ENST00000616074 TNFAIP8O95379 198 aa15.18■□□□□ 0.02
TRAPPC3-208ENST00000616074 TMEM50AO95807 157 aa15.18■□□□□ 0.02
TRAPPC3-208ENST00000616074 AKR1C2P52895 323 aa15.18■□□□□ 0.02
TRAPPC3-208ENST00000616074 RPL11P62913 178 aaKnown RBP15.18■□□□□ 0.02
TRAPPC3-208ENST00000616074 RBMS2Q15434 407 aaKnown RBP15.18■□□□□ 0.02
TRAPPC3-208ENST00000616074 MFFQ9GZY8 342 aa15.18■□□□□ 0.02
TRAPPC3-208ENST00000616074 KLK11Q9UBX7 282 aa15.18■□□□□ 0.02
TRAPPC3-208ENST00000616074 HECTD4Q9Y4D8 3996 aa15.18■□□□□ 0.02
TRAPPC3-208ENST00000616074 TRAV2A0A0B4J234 112 aa15.17■□□□□ 0.02
TRAPPC3-208ENST00000616074 IFNA17P01571 189 aa15.17■□□□□ 0.02
TRAPPC3-208ENST00000616074 RNASE2P10153 161 aaKnown RBP15.17■□□□□ 0.02
TRAPPC3-208ENST00000616074 TMEM187Q14656 261 aa15.17■□□□□ 0.02
TRAPPC3-208ENST00000616074 MRPL36Q9P0J6 103 aaKnown RBP15.17■□□□□ 0.02
TRAPPC3-208ENST00000616074 C3orf85A0A1B0GTC6 90 aa15.16■□□□□ 0.02
TRAPPC3-208ENST00000616074 ETV6P41212 452 aa15.16■□□□□ 0.02
TRAPPC3-208ENST00000616074 PPP5CP53041 499 aa15.16■□□□□ 0.02
TRAPPC3-208ENST00000616074 RNASE10Q5GAN6 216 aaKnown RBP15.16■□□□□ 0.02
TRAPPC3-208ENST00000616074 PDCD10Q9BUL8 212 aa15.16■□□□□ 0.02
TRAPPC3-208ENST00000616074 FNDC4Q9H6D8 234 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC3-208ENST00000616074 RABAC1Q9UI14 185 aa15.16■□□□□ 0.02
TRAPPC3-208ENST00000616074 AGRNO00468 2067 aa15.16■□□□□ 0.02
TRAPPC3-208ENST00000616074 A0A0G2JRQ6 117 aa15.15■□□□□ 0.02
TRAPPC3-208ENST00000616074 FAM25AB3EWG3 89 aa15.15■□□□□ 0.02
TRAPPC3-208ENST00000616074 FAM25CB3EWG5 89 aa15.15■□□□□ 0.02
TRAPPC3-208ENST00000616074 FAM25GB3EWG6 89 aa15.15■□□□□ 0.02
TRAPPC3-208ENST00000616074 CORTO00230 105 aa15.15■□□□□ 0.02
TRAPPC3-208ENST00000616074 CD3DP04234 171 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms