RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 SMIM17P0DL12 118 aa7.35□□□□□ -1.23
PDLIM5-222ENST00000615540 COX6B1P14854 86 aa7.35□□□□□ -1.23
PDLIM5-222ENST00000615540 Q6ZS92 163 aa7.35□□□□□ -1.23
PDLIM5-222ENST00000615540 NUP37Q8NFH4 326 aa7.35□□□□□ -1.23
PDLIM5-222ENST00000615540 GGACTQ9BVM4 153 aa7.35□□□□□ -1.23
PDLIM5-222ENST00000615540 PF4V1P10720 104 aa7.35□□□□□ -1.23
PDLIM5-222ENST00000615540 FCER1GP30273 86 aa7.35□□□□□ -1.23
PDLIM5-222ENST00000615540 MFAP4P55083 255 aa7.35□□□□□ -1.23
PDLIM5-222ENST00000615540 NHLH1Q02575 133 aa7.35□□□□□ -1.23
PDLIM5-222ENST00000615540 LRP4O75096 1905 aa7.35□□□□□ -1.23
PDLIM5-222ENST00000615540 IGKV1-39P01597 117 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 IGKV1D-39P04432 117 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 MLANAQ16655 118 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 STXBP6Q8NFX7 210 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 ASCL2Q99929 193 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 IGHV2-26A0A0B4J1V2 119 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 SRIP30626 198 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 GRAMD2BQ96HH9 432 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 MRPL32Q9BYC8 188 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 SVILO95425 2214 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 ISLRO14498 428 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 THBDP07204 575 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 EFNB3Q15768 340 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 ADIPOQQ15848 244 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 PIP4P1Q86T03 277 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 ATOH7Q8N100 152 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 VKORC1Q9BQB6 163 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 CBLN4Q9NTU7 201 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 IGKV1-16P04430 117 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 PDLIM4P50479 330 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 KRTAP27-1Q3LI81 207 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 C16orf92Q96LL3 132 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 CORTO00230 105 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 GNLYP22749 145 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 RIGQ13278 110 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 Q6ZN92 141 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 VMO1Q7Z5L0 202 aa7.34□□□□□ -1.23
PDLIM5-222ENST00000615540 CEP192Q8TEP8 1941 aa7.34□□□□□ -1.24
PDLIM5-222ENST00000615540 TIMM23O14925 209 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 WNT2P09544 360 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 ATP5G2Q06055 141 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 SRSF12Q8WXF0 261 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 ARPC1AQ92747 370 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 SEPSECSQ9HD40 501 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 YTHDF2Q9Y5A9 579 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 ARID1AO14497 2285 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 CBY3A6NI87 242 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 DIRC3C9JPN6 131 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 E7EQL1 145 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 SMAD7O15105 426 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 CNTFRP26992 372 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 CDX1P47902 265 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 PRCDQ00LT1 54 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 RELBQ01201 579 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 TMEM30BQ3MIR4 351 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 SH2D7A6NKC9 451 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 H0YJW9 148 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 M0QZ24 198 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 IGHV1-8P0DP01 117 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 ZNF672Q499Z4 452 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 Q6ZS49 121 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 ZNF738Q8NE65 137 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 FAM215AQ9Y5M1 114 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 ADMP35318 185 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 PKIAP61925 76 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 GFI1BQ5VTD9 330 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 METTL26Q96S19 204 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 PCDH15Q96QU1 1955 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 SELENOTP62341 195 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 FAM162BQ5T6X4 162 aa7.33□□□□□ -1.24
PDLIM5-222ENST00000615540 COLCA2A8K830 154 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 CA1P00915 261 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 PAX9P55771 341 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 CLEC19AQ6UXS0 136 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 BPIFA4PQ86YQ2 179 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 Q9H3A6 140 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 DPM3Q9P2X0 92 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 PEX7O00628 323 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 GPR183P32249 361 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 FBXL7Q9UJT9 491 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 TMEM50AO95807 157 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 RNF151Q2KHN1 245 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 OR52E5Q8NH55 327 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 RNF24Q9Y225 148 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 C15orf62A8K5M9 175 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 ASPHD1Q5U4P2 390 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 TEX45Q8NA69 505 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 LINC00527Q9UJ94 153 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 BMPR1BO00238 502 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 RPP25LQ8N5L8 163 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 GGTLC1Q9BX51 225 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 MAP1LC3CQ9BXW4 147 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 IL36BQ9NZH7 164 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 RPUSD1Q9UJJ7 312 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 PI4KAP42356 2102 aa7.32□□□□□ -1.24
PDLIM5-222ENST00000615540 A0A087WWC5 75 aa7.31□□□□□ -1.24
PDLIM5-222ENST00000615540 ZNF134P52741 427 aa7.31□□□□□ -1.24
PDLIM5-222ENST00000615540 RELQ04864 619 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-222ENST00000615540 TCF15Q12870 199 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms