RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-211ENST00000612509 SHPKQ9UHJ6 478 aa13.73□□□□□ -0.21
SEMA3B-211ENST00000612509 I3L2K1 104 aa13.72□□□□□ -0.21
SEMA3B-211ENST00000612509 SPCS3P61009 180 aa13.72□□□□□ -0.21
SEMA3B-211ENST00000612509 FAM106AQ4KMX7 169 aa13.72□□□□□ -0.21
SEMA3B-211ENST00000612509 Q56UQ5 140 aa13.72□□□□□ -0.21
SEMA3B-211ENST00000612509 NMSQ5H8A3 153 aa13.72□□□□□ -0.21
SEMA3B-211ENST00000612509 CENPSQ8N2Z9 138 aa13.72□□□□□ -0.21
SEMA3B-211ENST00000612509 UBAC2Q8NBM4 344 aa13.72□□□□□ -0.21
SEMA3B-211ENST00000612509 DYNLRB2Q8TF09 96 aa13.72□□□□□ -0.21
SEMA3B-211ENST00000612509 LINC00854A0A1B0GVQ3 168 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 TMEM213A2RRL7 107 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 MT-CO2P00403 227 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 SULT1A3P0DMM9 295 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 SULT1A4P0DMN0 295 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 RNASE2P10153 161 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 VAMP1P23763 118 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 SNCAP37840 140 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 PPP1R1AQ13522 171 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 LCN12Q6JVE5 192 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 SPSB3Q6PJ21 355 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 UNQ9165/PRO28630Q6UXU0 137 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 LYZL2Q7Z4W2 148 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 PINX1Q96BK5 328 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 B9D2Q9BPU9 175 aa13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 C7orf50Q9BRJ6 194 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 ZNF436Q9C0F3 470 aaPredicted RBP13.71□□□□□ -0.21
SEMA3B-211ENST00000612509 IGHV3-35A0A0C4DH35 117 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 ZNF320A2RRD8 509 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 A6NHS1 94 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 NDUFB6O95139 128 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 NXPH3O95157 252 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 FOLR2P14207 255 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 BTCP35070 178 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 CNPY1Q3B7I2 92 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 PVRIGQ6DKI7 326 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 OR2K2Q8NGT1 345 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 CACNG8Q8WXS5 425 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 TMEM190Q8WZ59 177 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 CHRDL1Q9BU40 450 aa13.7□□□□□ -0.22
SEMA3B-211ENST00000612509 PIGBOS1A0A0B4J2F0 54 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 DUXBA0A1W2PPF3 345 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 CENPXA8MT69 81 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 CORTO00230 105 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 SFT2D2O95562 160 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 FCGR2BP31994 310 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 ADMP35318 185 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 SUB1P53999 127 aaKnown RBP eCLIP13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 CD69Q07108 199 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 SMCO1Q147U7 214 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 BSXQ3C1V8 233 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 ANKRD55Q3KP44 614 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 PALMDQ9NP74 551 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 GAR1Q9NY12 217 aaKnown RBP13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 SMAD5-AS1Q9Y6J3 95 aa13.69□□□□□ -0.22
SEMA3B-211ENST00000612509 IZUMO1RA6ND01 250 aa13.68□□□□□ -0.22
SEMA3B-211ENST00000612509 CEBPZOSA8MTT3 80 aa13.68□□□□□ -0.22
SEMA3B-211ENST00000612509 IGHV3-48P01763 117 aa13.68□□□□□ -0.22
SEMA3B-211ENST00000612509 MFAP4P55083 255 aa13.68□□□□□ -0.22
SEMA3B-211ENST00000612509 UBE2MP61081 183 aaKnown RBP13.68□□□□□ -0.22
SEMA3B-211ENST00000612509 CD300EQ496F6 205 aaPredicted RBP13.68□□□□□ -0.22
SEMA3B-211ENST00000612509 LINC00299Q6ZSB3 139 aa13.68□□□□□ -0.22
SEMA3B-211ENST00000612509 LRTM2Q8N967 370 aa13.68□□□□□ -0.22
SEMA3B-211ENST00000612509 CACFD1Q9UGQ2 172 aa13.68□□□□□ -0.22
SEMA3B-211ENST00000612509 UFC1Q9Y3C8 167 aa13.68□□□□□ -0.22
SEMA3B-211ENST00000612509 NDUFA4O00483 81 aa13.67□□□□□ -0.22
SEMA3B-211ENST00000612509 CBLN1P23435 193 aa13.67□□□□□ -0.22
SEMA3B-211ENST00000612509 DEFB114Q30KQ6 69 aa13.67□□□□□ -0.22
SEMA3B-211ENST00000612509 TM4SF20Q53R12 229 aa13.67□□□□□ -0.22
SEMA3B-211ENST00000612509 SLC24A4Q8NFF2 622 aa13.67□□□□□ -0.22
SEMA3B-211ENST00000612509 TXN2Q99757 166 aa13.67□□□□□ -0.22
SEMA3B-211ENST00000612509 TECRQ9NZ01 308 aaKnown RBP13.67□□□□□ -0.22
SEMA3B-211ENST00000612509 NUPL2O15504 423 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 CTSGP08311 255 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 OPRK1P41145 380 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 HTR2BP41595 481 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 ELLP55199 621 aaPredicted RBP13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 RELQ04864 619 aaPredicted RBP13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 TNFRSF9Q07011 255 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 C11orf87Q6NUJ2 197 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 UXS1Q8NBZ7 420 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 MARC2Q969Z3 335 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 ZNF414Q96IQ9 312 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 CCDC32Q9BV29 185 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 HEYLQ9NQ87 328 aaPredicted RBP13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 HSPB7Q9UBY9 170 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 MLXQ9UH92 298 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 FLVCR2Q9UPI3 526 aa13.66□□□□□ -0.22
SEMA3B-211ENST00000612509 A0A1B0GU03 582 aa13.65□□□□□ -0.22
SEMA3B-211ENST00000612509 GNG7O60262 68 aa13.65□□□□□ -0.22
SEMA3B-211ENST00000612509 BTNL8Q6UX41 500 aa13.65□□□□□ -0.22
SEMA3B-211ENST00000612509 DUSP18Q8NEJ0 188 aa13.65□□□□□ -0.22
SEMA3B-211ENST00000612509 OR1S1Q8NH92 325 aa13.65□□□□□ -0.22
SEMA3B-211ENST00000612509 FNDC4Q9H6D8 234 aaPredicted RBP13.65□□□□□ -0.22
SEMA3B-211ENST00000612509 DAZ1Q9NQZ3 744 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-211ENST00000612509 PTTG2Q9NZH5 202 aa13.65□□□□□ -0.22
SEMA3B-211ENST00000612509 PLA2G10O15496 165 aa13.64□□□□□ -0.23
SEMA3B-211ENST00000612509 LYRM1O43325 122 aa13.64□□□□□ -0.23
SEMA3B-211ENST00000612509 C8orf88P0DMB2 117 aa13.64□□□□□ -0.23
SEMA3B-211ENST00000612509 NPBWR1P48145 328 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms