RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 I3L2K1 104 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 LSM3P62310 102 aaKnown RBP9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 PRR20EP86478 221 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 PRR20CP86479 221 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 PRR20DP86480 221 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 PRR20BP86481 221 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 PRR20AP86496 221 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 IZUMO4Q1ZYL8 232 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 DHRS11Q6UWP2 260 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 TBC1D26Q86UD7 250 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 C2CD4CQ8TF44 421 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 ZNF414Q96IQ9 312 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 OR10C1Q96KK4 312 aa9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 NXF2Q9GZY0 626 aaKnown RBP9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 C11orf68Q9H3H3 251 aaKnown RBP9.78□□□□□ -0.84
HMGB1P24-201ENST00000611897 IGLL5B9A064 214 aa9.77□□□□□ -0.85
HMGB1P24-201ENST00000611897 DFFBO76075 338 aa9.77□□□□□ -0.85
HMGB1P24-201ENST00000611897 APOHP02749 345 aaPredicted RBP9.77□□□□□ -0.85
HMGB1P24-201ENST00000611897 PRSS3P35030 304 aa9.77□□□□□ -0.85
HMGB1P24-201ENST00000611897 RNASE12Q5GAN4 147 aaKnown RBP9.77□□□□□ -0.85
HMGB1P24-201ENST00000611897 TOMM20LQ6UXN7 152 aa9.77□□□□□ -0.85
HMGB1P24-201ENST00000611897 STHQ8IWL8 128 aa9.77□□□□□ -0.85
HMGB1P24-201ENST00000611897 FAM24BQ8N5W8 94 aa9.77□□□□□ -0.85
HMGB1P24-201ENST00000611897 MS4A6AQ9H2W1 248 aa9.77□□□□□ -0.85
HMGB1P24-201ENST00000611897 PUS1Q9Y606 427 aaKnown RBP eCLIP9.77□□□□□ -0.85
HMGB1P24-201ENST00000611897 HERC2O95714 4834 aa9.77□□□□□ -0.85
HMGB1P24-201ENST00000611897 DNAH10Q8IVF4 4471 aa9.76□□□□□ -0.85
HMGB1P24-201ENST00000611897 ERHP84090 104 aaKnown RBP9.76□□□□□ -0.85
HMGB1P24-201ENST00000611897 PRCDQ00LT1 54 aa9.76□□□□□ -0.85
HMGB1P24-201ENST00000611897 FAM90A2PQ658T7 463 aa9.76□□□□□ -0.85
HMGB1P24-201ENST00000611897 SNX29P2Q8IUI4 249 aa9.76□□□□□ -0.85
HMGB1P24-201ENST00000611897 SLC35G3Q8N808 338 aa9.76□□□□□ -0.85
HMGB1P24-201ENST00000611897 STXBP6Q8NFX7 210 aa9.76□□□□□ -0.85
HMGB1P24-201ENST00000611897 SEC22AQ96IW7 307 aa9.76□□□□□ -0.85
HMGB1P24-201ENST00000611897 TXN2Q99757 166 aa9.76□□□□□ -0.85
HMGB1P24-201ENST00000611897 YTHDF1Q9BYJ9 559 aaKnown RBP9.76□□□□□ -0.85
HMGB1P24-201ENST00000611897 ANAPC10Q9UM13 185 aa9.76□□□□□ -0.85
HMGB1P24-201ENST00000611897 ATP6V1G2O95670 118 aa9.75□□□□□ -0.85
HMGB1P24-201ENST00000611897 IGKV1-39P01597 117 aa9.75□□□□□ -0.85
HMGB1P24-201ENST00000611897 IGKV1D-39P04432 117 aa9.75□□□□□ -0.85
HMGB1P24-201ENST00000611897 PGAM2P15259 253 aa9.75□□□□□ -0.85
HMGB1P24-201ENST00000611897 SNCAP37840 140 aa9.75□□□□□ -0.85
HMGB1P24-201ENST00000611897 NPBWR1P48145 328 aa9.75□□□□□ -0.85
HMGB1P24-201ENST00000611897 AKR1C2P52895 323 aa9.75□□□□□ -0.85
HMGB1P24-201ENST00000611897 ZNF600Q6ZNG1 722 aa9.75□□□□□ -0.85
HMGB1P24-201ENST00000611897 CROCCP3Q8IVE0 287 aa9.75□□□□□ -0.85
HMGB1P24-201ENST00000611897 LILRB2Q8N423 598 aa9.75□□□□□ -0.85
HMGB1P24-201ENST00000611897 DUSP18Q8NEJ0 188 aa9.75□□□□□ -0.85
HMGB1P24-201ENST00000611897 KNCNA6PVL3 124 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 IFNA17P01571 189 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 ZNF688P0C7X2 276 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 NAT1P18440 290 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 PI3P19957 117 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 RPS19P39019 145 aaKnown RBP9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 HOXA1P49639 335 aaPredicted RBP9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 HSPE1P61604 102 aaKnown RBP9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 LPCAT3Q6P1A2 487 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 LYSMD2Q8IV50 215 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 CENPSQ8N2Z9 138 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 ZNF114Q8NC26 417 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 PDCD10Q9BUL8 212 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 TMEM231Q9H6L2 316 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
HMGB1P24-201ENST00000611897 IGHV4-28A0A0C4DH34 117 aa9.73□□□□□ -0.85
HMGB1P24-201ENST00000611897 A0A1B0GU03 582 aa9.73□□□□□ -0.85
HMGB1P24-201ENST00000611897 M0QYG6 137 aa9.73□□□□□ -0.85
HMGB1P24-201ENST00000611897 HLA-DMBP28068 263 aa9.73□□□□□ -0.85
HMGB1P24-201ENST00000611897 PPP5CP53041 499 aa9.73□□□□□ -0.85
HMGB1P24-201ENST00000611897 CADM3Q8N126 398 aa9.73□□□□□ -0.85
HMGB1P24-201ENST00000611897 Q8NAQ8 132 aa9.73□□□□□ -0.85
HMGB1P24-201ENST00000611897 RNASE11Q8TAA1 199 aaKnown RBP9.73□□□□□ -0.85
HMGB1P24-201ENST00000611897 VSIRQ9H7M9 311 aa9.73□□□□□ -0.85
HMGB1P24-201ENST00000611897 CLEC5AQ9NY25 188 aa9.73□□□□□ -0.85
HMGB1P24-201ENST00000611897 COMMD3Q9UBI1 195 aa9.73□□□□□ -0.85
HMGB1P24-201ENST00000611897 SMIM31A0A1B0GVY4 71 aa9.72□□□□□ -0.85
HMGB1P24-201ENST00000611897 TMEM127O75204 238 aa9.72□□□□□ -0.85
HMGB1P24-201ENST00000611897 CD5P06127 495 aa9.72□□□□□ -0.85
HMGB1P24-201ENST00000611897 C4BPBP20851 252 aa9.72□□□□□ -0.85
HMGB1P24-201ENST00000611897 NPPCP23582 126 aa9.72□□□□□ -0.85
HMGB1P24-201ENST00000611897 RCVRNP35243 200 aa9.72□□□□□ -0.85
HMGB1P24-201ENST00000611897 OPRK1P41145 380 aa9.72□□□□□ -0.85
HMGB1P24-201ENST00000611897 GPX8Q8TED1 209 aa9.72□□□□□ -0.85
HMGB1P24-201ENST00000611897 METTL26Q96S19 204 aa9.72□□□□□ -0.85
HMGB1P24-201ENST00000611897 ENY2Q9NPA8 101 aa9.72□□□□□ -0.85
HMGB1P24-201ENST00000611897 C11orf94C9JXX5 98 aa9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 RBMY1A1P0DJD3 496 aaKnown RBP9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 RBMY1CP0DJD4 496 aa9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 ETV6P41212 452 aa9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 P2RY1P47900 373 aa9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 RBMY1FQ15415 496 aaKnown RBP9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 TRIM16LQ309B1 348 aa9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 ACTL10Q5JWF8 245 aa9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 Q6ZTC4 211 aa9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 ZNF767PQ75MW2 155 aa9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 TMEM230Q96A57 120 aa9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 NARS2Q96I59 477 aaKnown RBP9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 FAM212BQ9NTI7 297 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 MRPL36Q9P0J6 103 aaKnown RBP9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 APLNQ9ULZ1 77 aa9.71□□□□□ -0.86
HMGB1P24-201ENST00000611897 VPS13DQ5THJ4 4388 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms