RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.54	□□□□□ -0.56
MUC1-223	ENST00000611571	FOLR2	P14207	255 aa		11.54	□□□□□ -0.56
MUC1-223	ENST00000611571	BPIFA4P	Q86YQ2	179 aa		11.54	□□□□□ -0.56
MUC1-223	ENST00000611571	OR4C13	Q8NGP0	309 aa		11.54	□□□□□ -0.56
MUC1-223	ENST00000611571	SNRNP40	Q96DI7	357 aa	Known RBP	11.54	□□□□□ -0.56
MUC1-223	ENST00000611571	LYNX1	G3V0Z9	82 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	NBEAP1	P0C6P0	100 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	LYNX1	P0DP58	116 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	DUT	P33316	252 aa	Known RBP	11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	TIMP3	P35625	211 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	GPX4	P36969	197 aa	Predicted RBP	11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	SELENOT	P62341	195 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	ZNF738	Q8NE65	137 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	GTF3A	Q92664	365 aa	Known RBP	11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	FBXL15	Q9H469	300 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	CEACAM3	P40198	252 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	B3GALT5-AS1	P59052	145 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	EFNB3	Q15768	340 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	FAM90A2P	Q658T7	463 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	TMEM116	Q8NCL8	245 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	TMEM170A	Q8WVE7	144 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	NDUFAF3	Q9BU61	184 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	AMY1A	P04745	511 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	GLRX	P35754	106 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	TREML4	Q6UXN2	200 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	TCF24	Q7RTU0	167 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	WDR83OS	Q9Y284	106 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	IGF2R	P11717	2491 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	TRBV24-1	A0A075B6N3	115 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	OR4C46	A6NHA9	309 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	TWIST1	Q15672	202 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	LAMA3	Q16787	3333 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	IFI27L2	Q9H2X8	130 aa		11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	F11R	Q9Y624	299 aa	Known RBP	11.53	□□□□□ -0.56
MUC1-223	ENST00000611571	IFNL4	K9M1U5	179 aa		11.52	□□□□□ -0.56
MUC1-223	ENST00000611571	FOXH1	O75593	365 aa		11.52	□□□□□ -0.56
MUC1-223	ENST00000611571	LYL1	P12980	280 aa		11.52	□□□□□ -0.56
MUC1-223	ENST00000611571	ZNF146	Q15072	292 aa		11.52	□□□□□ -0.56
MUC1-223	ENST00000611571	PRR7	Q8TB68	274 aa		11.52	□□□□□ -0.56
MUC1-223	ENST00000611571	NRN1	Q9NPD7	142 aa		11.52	□□□□□ -0.56
MUC1-223	ENST00000611571	TMEM265	A0A087WTH1	108 aa		11.52	□□□□□ -0.57
MUC1-223	ENST00000611571	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.52	□□□□□ -0.57
MUC1-223	ENST00000611571	IQCF6	A8MYZ5	107 aa		11.52	□□□□□ -0.57
MUC1-223	ENST00000611571	NRN1L	Q496H8	165 aa		11.52	□□□□□ -0.57
MUC1-223	ENST00000611571	TAS2R60	P59551	318 aa		11.52	□□□□□ -0.57
MUC1-223	ENST00000611571	ZNF585B	Q52M93	769 aa		11.52	□□□□□ -0.57
MUC1-223	ENST00000611571	LINC01551	Q86U37	167 aa		11.52	□□□□□ -0.57
MUC1-223	ENST00000611571	LINC01560	Q8TB33	94 aa		11.52	□□□□□ -0.57
MUC1-223	ENST00000611571	KLK15	Q9H2R5	256 aa		11.52	□□□□□ -0.57
MUC1-223	ENST00000611571	UBTD1	Q9HAC8	227 aa		11.52	□□□□□ -0.57
MUC1-223	ENST00000611571	ZNRD1	Q9P1U0	126 aa		11.52	□□□□□ -0.57
MUC1-223	ENST00000611571	ZNF503-AS2	A6NEH8	195 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	NTN3	O00634	580 aa	Predicted RBP	11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	NDUFA2	O43678	99 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	SAA1	P0DJI8	122 aa	Predicted RBP	11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	MBNL2	Q5VZF2	373 aa	Known RBP	11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	TEX38	Q6PEX7	206 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	ZNF841	Q6ZN19	808 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	C18orf15	Q96N68	181 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	RAB1B	Q9H0U4	201 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	TMEM106B	Q9NUM4	274 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	CCL21	O00585	134 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	SMIM17	P0DL12	118 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	PCP4	P48539	62 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	CDPF1	Q6NVV7	123 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	PNKD	Q8N490	385 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	HIGD1C	A8MV81	97 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	IL4	P05112	153 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	CKS2	P33552	79 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	LGALS7	P47929	136 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	OR5R1	Q8NH85	324 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	KIAA1671	Q9BY89	1806 aa		11.51	□□□□□ -0.57
MUC1-223	ENST00000611571	IGHV3-66	A0A0C4DH42	116 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	PMCHL1	Q16048	86 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	TM4SF20	Q53R12	229 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	PROK2	Q9HC23	129 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	NCOR2	Q9Y618	2525 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	BTF3	P20290	206 aa	Known RBP	11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	CFP	P27918	469 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	PAX9	P55771	341 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	SCNM1	Q9BWG6	230 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	GGTLC1	Q9BX51	225 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	HSPB8	Q9UJY1	196 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	CCDC168	Q8NDH2	2452 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	MC5R	P33032	325 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	RNFT1	Q5M7Z0	435 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	ASPHD1	Q5U4P2	390 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	LCN12	Q6JVE5	192 aa		11.5	□□□□□ -0.57
MUC1-223	ENST00000611571	ZNF788	Q6ZQV5	615 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	IGKV3D-15	A0A087WSY6	115 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	NUDT3	O95989	172 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	SCGB1C2	P0DMR2	95 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	ZNF664	Q8N3J9	261 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	OR4A5	Q8NH83	315 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	LINC00479	Q96M42	142 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	MRPL37	Q9BZE1	423 aa	Known RBP	11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	PLA2G2E	Q9NZK7	142 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	TMEM189	A5PLL7	270 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	RPL7	P18124	248 aa	Known RBP	11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	TMEM14EP	Q6UXP3	125 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms