RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 TCF24Q7RTU0 167 aa9.83□□□□□ -0.84
POLR2J3-219ENST00000608621 GATAD1Q8WUU5 269 aa9.83□□□□□ -0.84
POLR2J3-219ENST00000608621 YIPF6Q96EC8 236 aa9.83□□□□□ -0.84
POLR2J3-219ENST00000608621 COMMD3Q9UBI1 195 aa9.83□□□□□ -0.84
POLR2J3-219ENST00000608621 SMIM31A0A1B0GVY4 71 aa9.82□□□□□ -0.84
POLR2J3-219ENST00000608621 DEDDO75618 318 aa9.82□□□□□ -0.84
POLR2J3-219ENST00000608621 APOHP02749 345 aaPredicted RBP9.82□□□□□ -0.84
POLR2J3-219ENST00000608621 UCP3P55916 312 aa9.82□□□□□ -0.84
POLR2J3-219ENST00000608621 PAFAH1B2P68402 229 aa9.82□□□□□ -0.84
POLR2J3-219ENST00000608621 IZUMO4Q1ZYL8 232 aa9.82□□□□□ -0.84
POLR2J3-219ENST00000608621 TOMM20LQ6UXN7 152 aa9.82□□□□□ -0.84
POLR2J3-219ENST00000608621 LILRB2Q8N423 598 aa9.82□□□□□ -0.84
POLR2J3-219ENST00000608621 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
POLR2J3-219ENST00000608621 OR11H2Q8NH07 326 aa9.82□□□□□ -0.84
POLR2J3-219ENST00000608621 MRGPRFQ96AM1 343 aa9.82□□□□□ -0.84
POLR2J3-219ENST00000608621 KMT2AQ03164 3969 aa9.81□□□□□ -0.84
POLR2J3-219ENST00000608621 ST8SIA3O43173 380 aa9.81□□□□□ -0.84
POLR2J3-219ENST00000608621 NANOS2P60321 138 aaKnown RBP9.81□□□□□ -0.84
POLR2J3-219ENST00000608621 SPINK9Q5DT21 86 aa9.81□□□□□ -0.84
POLR2J3-219ENST00000608621 LGALS9CQ6DKI2 356 aa9.81□□□□□ -0.84
POLR2J3-219ENST00000608621 SNX29P2Q8IUI4 249 aa9.81□□□□□ -0.84
POLR2J3-219ENST00000608621 DUSP18Q8NEJ0 188 aa9.81□□□□□ -0.84
POLR2J3-219ENST00000608621 ST8SIA2Q92186 375 aa9.81□□□□□ -0.84
POLR2J3-219ENST00000608621 GINS3Q9BRX5 216 aa9.81□□□□□ -0.84
POLR2J3-219ENST00000608621 VSIRQ9H7M9 311 aa9.81□□□□□ -0.84
POLR2J3-219ENST00000608621 SCPEP1Q9HB40 452 aa9.81□□□□□ -0.84
POLR2J3-219ENST00000608621 IGHV3-66A0A0C4DH42 116 aa9.8□□□□□ -0.84
POLR2J3-219ENST00000608621 DNASE2O00115 360 aaPredicted RBP9.8□□□□□ -0.84
POLR2J3-219ENST00000608621 DFFBO76075 338 aa9.8□□□□□ -0.84
POLR2J3-219ENST00000608621 TMEM50AO95807 157 aa9.8□□□□□ -0.84
POLR2J3-219ENST00000608621 APOA1P02647 267 aa9.8□□□□□ -0.84
POLR2J3-219ENST00000608621 CD5P06127 495 aa9.8□□□□□ -0.84
POLR2J3-219ENST00000608621 NPBWR1P48145 328 aa9.8□□□□□ -0.84
POLR2J3-219ENST00000608621 DEFB131AP59861 70 aa9.8□□□□□ -0.84
POLR2J3-219ENST00000608621 C11orf45Q8TAV5 145 aa9.8□□□□□ -0.84
POLR2J3-219ENST00000608621 MS4A6AQ9H2W1 248 aa9.8□□□□□ -0.84
POLR2J3-219ENST00000608621 FBXL17Q9UF56 701 aa9.8□□□□□ -0.84
POLR2J3-219ENST00000608621 FRAS1Q86XX4 4008 aa9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 M0QYG6 137 aa9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 DEFB4AO15263 64 aa9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 CA1P00915 261 aaPredicted RBP9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 IFNA4P05014 189 aa9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 ELK1P19419 428 aa9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 RCVRNP35243 200 aa9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 SNCAP37840 140 aa9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 RPL11P62913 178 aaKnown RBP9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 RBMS2Q15434 407 aaKnown RBP9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 LEMD1Q68G75 181 aa9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 ZNF600Q6ZNG1 722 aa9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 MFFQ9GZY8 342 aa9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 ZFAND3Q9H8U3 227 aa9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 PUS1Q9Y606 427 aaKnown RBP eCLIP9.79□□□□□ -0.84
POLR2J3-219ENST00000608621 DNAH10Q8IVF4 4471 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 A0A087WXM4 84 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 A0A0B4J293 547 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 A0A1B0GU03 582 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 HPGDSO60760 199 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 IFNA17P01571 189 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 IGKV1-5P01602 117 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 PGAM2P15259 253 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 PI3P19957 117 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 NCS1P62166 190 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 TMEM187Q14656 261 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 FAM24BQ8N5W8 94 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 C11orf68Q9H3H3 251 aaKnown RBP9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 VCX3AQ9NNX9 186 aa9.78□□□□□ -0.84
POLR2J3-219ENST00000608621 NPPCP23582 126 aa9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 ETV6P41212 452 aa9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 PIGPP57054 158 aa9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 RND3P61587 244 aa9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 VBP1P61758 197 aa9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 MLANAQ16655 118 aa9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 RNASE12Q5GAN4 147 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 PVRIGQ6DKI7 326 aa9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 SLC35G3Q8N808 338 aa9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 ZNF486Q96H40 463 aaPredicted RBP9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 TP53RKQ96S44 253 aa9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 KLK11Q9UBX7 282 aa9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 RABAC1Q9UI14 185 aa9.77□□□□□ -0.85
POLR2J3-219ENST00000608621 AGRNO00468 2067 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 INS-IGF2F8WCM5 200 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 P0C879 139 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 RNASE2P10153 161 aaKnown RBP9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 AKR1C2P52895 323 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 SUB1P53999 127 aaKnown RBP eCLIP9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 LHFPL1Q86WI0 220 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 STHQ8IWL8 128 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 C2CD4CQ8TF44 421 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 PDCD10Q9BUL8 212 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 FUNDC2Q9BWH2 189 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 KRTAP17-1Q9BYP8 105 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 FNDC4Q9H6D8 234 aaPredicted RBP9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 TMEM231Q9H6L2 316 aa9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 MRPL36Q9P0J6 103 aaKnown RBP9.76□□□□□ -0.85
POLR2J3-219ENST00000608621 C3orf85A0A1B0GTC6 90 aa9.75□□□□□ -0.85
POLR2J3-219ENST00000608621 A0A1W2PS18 150 aa9.75□□□□□ -0.85
POLR2J3-219ENST00000608621 FAM25AB3EWG3 89 aa9.75□□□□□ -0.85
POLR2J3-219ENST00000608621 FAM25CB3EWG5 89 aa9.75□□□□□ -0.85
POLR2J3-219ENST00000608621 FAM25GB3EWG6 89 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms