RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 CA1P00915 261 aaPredicted RBP13□□□□□ -0.33
CCDC12-212ENST00000605358 PMP2P02689 132 aa13□□□□□ -0.33
CCDC12-212ENST00000605358 HSPE1P61604 102 aaKnown RBP13□□□□□ -0.33
CCDC12-212ENST00000605358 ZNF124Q15973 351 aa13□□□□□ -0.33
CCDC12-212ENST00000605358 H2BFWTQ7Z2G1 175 aa13□□□□□ -0.33
CCDC12-212ENST00000605358 SEC22AQ96IW7 307 aa13□□□□□ -0.33
CCDC12-212ENST00000605358 RNF167Q9H6Y7 350 aa13□□□□□ -0.33
CCDC12-212ENST00000605358 VPS13DQ5THJ4 4388 aa13□□□□□ -0.33
CCDC12-212ENST00000605358 DNAH6Q9C0G6 4158 aa12.99□□□□□ -0.33
CCDC12-212ENST00000605358 DBX1A6NMT0 343 aa12.99□□□□□ -0.33
CCDC12-212ENST00000605358 DNASE2O00115 360 aaPredicted RBP12.99□□□□□ -0.33
CCDC12-212ENST00000605358 PRSS3P35030 304 aa12.99□□□□□ -0.33
CCDC12-212ENST00000605358 TMEM69Q5SWH9 247 aa12.99□□□□□ -0.33
CCDC12-212ENST00000605358 MS4A6AQ9H2W1 248 aa12.99□□□□□ -0.33
CCDC12-212ENST00000605358 A0A1W2PS18 150 aa12.98□□□□□ -0.33
CCDC12-212ENST00000605358 INS-IGF2F8WCM5 200 aa12.98□□□□□ -0.33
CCDC12-212ENST00000605358 ST8SIA3O43173 380 aa12.98□□□□□ -0.33
CCDC12-212ENST00000605358 UCP3P55916 312 aa12.98□□□□□ -0.33
CCDC12-212ENST00000605358 TOMM20LQ6UXN7 152 aa12.98□□□□□ -0.33
CCDC12-212ENST00000605358 ZNF600Q6ZNG1 722 aa12.98□□□□□ -0.33
CCDC12-212ENST00000605358 LYSMD2Q8IV50 215 aa12.98□□□□□ -0.33
CCDC12-212ENST00000605358 GBGT1Q8N5D6 347 aa12.98□□□□□ -0.33
CCDC12-212ENST00000605358 FXYD6Q9H0Q3 95 aa12.98□□□□□ -0.33
CCDC12-212ENST00000605358 IGKV3-7A0A075B6H7 116 aa12.97□□□□□ -0.33
CCDC12-212ENST00000605358 IGHV3-49A0A0A0MS15 119 aa12.97□□□□□ -0.33
CCDC12-212ENST00000605358 TAS2R20P59543 309 aa12.97□□□□□ -0.33
CCDC12-212ENST00000605358 TSPAN5P62079 268 aa12.97□□□□□ -0.33
CCDC12-212ENST00000605358 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
CCDC12-212ENST00000605358 STHQ8IWL8 128 aa12.97□□□□□ -0.33
CCDC12-212ENST00000605358 ST8SIA2Q92186 375 aa12.97□□□□□ -0.33
CCDC12-212ENST00000605358 APLNQ9ULZ1 77 aa12.97□□□□□ -0.33
CCDC12-212ENST00000605358 CORTO00230 105 aa12.96□□□□□ -0.33
CCDC12-212ENST00000605358 SPP1P10451 314 aa12.96□□□□□ -0.33
CCDC12-212ENST00000605358 MIFP14174 115 aa12.96□□□□□ -0.33
CCDC12-212ENST00000605358 HRH1P35367 487 aa12.96□□□□□ -0.33
CCDC12-212ENST00000605358 DEFB131AP59861 70 aa12.96□□□□□ -0.33
CCDC12-212ENST00000605358 PVRIGQ6DKI7 326 aa12.96□□□□□ -0.33
CCDC12-212ENST00000605358 TBC1D26Q86UD7 250 aa12.96□□□□□ -0.33
CCDC12-212ENST00000605358 CENPSQ8N2Z9 138 aa12.96□□□□□ -0.33
CCDC12-212ENST00000605358 PINX1Q96BK5 328 aaKnown RBP12.96□□□□□ -0.33
CCDC12-212ENST00000605358 GRAMD2BQ96HH9 432 aa12.96□□□□□ -0.33
CCDC12-212ENST00000605358 SCPEP1Q9HB40 452 aa12.96□□□□□ -0.33
CCDC12-212ENST00000605358 IGHV3OR16-13A0A075B7E8 117 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 IGHV3-74A0A0B4J1X5 117 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 SCGB2A1O75556 95 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 NPPCP23582 126 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 SNCAP37840 140 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 SUB1P53999 127 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC12-212ENST00000605358 PRR20EP86478 221 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 PRR20CP86479 221 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 PRR20DP86480 221 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 PRR20BP86481 221 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 PRR20AP86496 221 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 KCTD21Q4G0X4 260 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 PHLDA2Q53GA4 152 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 LINC00336Q6ZUF6 198 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 SAMD12Q8N8I0 201 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 Q8NAQ8 132 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 ZFAND3Q9H8U3 227 aa12.95□□□□□ -0.34
CCDC12-212ENST00000605358 PUS1Q9Y606 427 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC12-212ENST00000605358 IGLL5B9A064 214 aa12.94□□□□□ -0.34
CCDC12-212ENST00000605358 ATG12O94817 140 aa12.94□□□□□ -0.34
CCDC12-212ENST00000605358 TMEM50AO95807 157 aa12.94□□□□□ -0.34
CCDC12-212ENST00000605358 IGKV1-39P01597 117 aa12.94□□□□□ -0.34
CCDC12-212ENST00000605358 IGKV1D-39P04432 117 aa12.94□□□□□ -0.34
CCDC12-212ENST00000605358 HLA-DMAP28067 261 aa12.94□□□□□ -0.34
CCDC12-212ENST00000605358 RPL11P62913 178 aaKnown RBP12.94□□□□□ -0.34
CCDC12-212ENST00000605358 LILRB2Q8N423 598 aa12.94□□□□□ -0.34
CCDC12-212ENST00000605358 GPX8Q8TED1 209 aa12.94□□□□□ -0.34
CCDC12-212ENST00000605358 SMIM31A0A1B0GVY4 71 aa12.93□□□□□ -0.34
CCDC12-212ENST00000605358 ZNF705EA8MWA4 302 aaPredicted RBP12.93□□□□□ -0.34
CCDC12-212ENST00000605358 LEMD1Q68G75 181 aa12.93□□□□□ -0.34
CCDC12-212ENST00000605358 TRPT1Q86TN4 253 aaKnown RBP12.93□□□□□ -0.34
CCDC12-212ENST00000605358 MRGPRFQ96AM1 343 aa12.93□□□□□ -0.34
CCDC12-212ENST00000605358 ZNF486Q96H40 463 aaPredicted RBP12.93□□□□□ -0.34
CCDC12-212ENST00000605358 NARS2Q96I59 477 aaKnown RBP12.93□□□□□ -0.34
CCDC12-212ENST00000605358 TRAV10A0A0B4J240 114 aa12.92□□□□□ -0.34
CCDC12-212ENST00000605358 DEFB4AO15263 64 aa12.92□□□□□ -0.34
CCDC12-212ENST00000605358 IGHV3-48P01763 117 aa12.92□□□□□ -0.34
CCDC12-212ENST00000605358 APOHP02749 345 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-212ENST00000605358 CRYBB3P26998 211 aa12.92□□□□□ -0.34
CCDC12-212ENST00000605358 RPS19P39019 145 aaKnown RBP12.92□□□□□ -0.34
CCDC12-212ENST00000605358 RPL5P46777 297 aaKnown RBP12.92□□□□□ -0.34
CCDC12-212ENST00000605358 EIF2B2P49770 351 aaKnown RBP12.92□□□□□ -0.34
CCDC12-212ENST00000605358 RND3P61587 244 aa12.92□□□□□ -0.34
CCDC12-212ENST00000605358 NEDD8Q15843 81 aa12.92□□□□□ -0.34
CCDC12-212ENST00000605358 METTL26Q96S19 204 aa12.92□□□□□ -0.34
CCDC12-212ENST00000605358 RABAC1Q9UI14 185 aa12.92□□□□□ -0.34
CCDC12-212ENST00000605358 TRAV30A0A087WSZ9 112 aa12.91□□□□□ -0.34
CCDC12-212ENST00000605358 K7EQG2 157 aa12.91□□□□□ -0.34
CCDC12-212ENST00000605358 GIG44P09565 113 aaPredicted RBP12.91□□□□□ -0.34
CCDC12-212ENST00000605358 RCVRNP35243 200 aa12.91□□□□□ -0.34
CCDC12-212ENST00000605358 SLC35G3Q8N808 338 aa12.91□□□□□ -0.34
CCDC12-212ENST00000605358 OR4X1Q8NH49 305 aa12.91□□□□□ -0.34
CCDC12-212ENST00000605358 RNF126Q9BV68 326 aa12.91□□□□□ -0.34
CCDC12-212ENST00000605358 IGHV4-28A0A0C4DH34 117 aa12.9□□□□□ -0.34
CCDC12-212ENST00000605358 A0A1B0GU03 582 aa12.9□□□□□ -0.34
CCDC12-212ENST00000605358 CLN5O75503 358 aa12.9□□□□□ -0.34
CCDC12-212ENST00000605358 APOA1P02647 267 aa12.9□□□□□ -0.34
CCDC12-212ENST00000605358 RBMY1A1P0DJD3 496 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms