RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 NDUFS6O75380 124 aaKnown RBP9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 M6PRP20645 277 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 CX3CL1P78423 397 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 AKR1C1Q04828 323 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 HNF4GQ14541 408 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ACOT6Q3I5F7 207 aaPredicted RBP9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 RUSC1-AS1Q66K80 236 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 TTC9CQ8N5M4 171 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 C5orf56Q8N8D9 126 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 THAP8Q8NA92 274 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 TMEM116Q8NCL8 245 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 FAM213BQ8TBF2 198 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PIFOQ8TCI5 191 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 MBD3L1Q8WWY6 194 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 RBMXL1Q96E39 390 aaKnown RBP9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 GGTLC1Q9BX51 225 aa9.75□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 IGHV7-81A0A0B4J1V7 117 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 SEC14L6B5MCN3 397 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 KRBOX1C9JBD0 128 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 TSPAN15O95858 294 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 AVPP01185 164 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 H2AFB1P0C5Y9 115 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 AREGP15514 252 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 SELENOTP62341 195 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 GNB1P62873 340 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PRR20EP86478 221 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PRR20CP86479 221 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PRR20DP86480 221 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PRR20BP86481 221 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PRR20AP86496 221 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ZNF616Q08AN1 781 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 GAMTQ14353 236 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 BRD3OSQ6XYD6 125 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 OR5R1Q8NH85 324 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 SGMS2Q8NHU3 365 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PCNPQ8WW12 178 aaKnown RBP9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 SSMEM1Q8WWF3 244 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ZNF48Q96MX3 618 aaPredicted RBP9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 MGST2Q99735 147 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 SSX3Q99909 188 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 SLC25A33Q9BSK2 321 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PRDM13Q9H4Q3 707 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 RPRMQ9NS64 109 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 CENPEQ02224 2701 aa9.74□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 CTXND1A0A1B0GTU2 59 aa9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 SMCO3A2RU48 225 aa9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 A6NDX4 124 aa9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 AGPAT2O15120 278 aa9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 BRI3O95415 125 aa9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 HIST1H1BP16401 226 aaKnown RBP9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 CD24P25063 80 aa9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 TAGLN2P37802 199 aaKnown RBP9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 FFAR4Q5NUL3 377 aa9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 FAM120AOSQ5T036 256 aa9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ABHD5Q8WTS1 349 aa9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PBDC1Q9BVG4 233 aa9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 THYN1Q9P016 225 aa9.73□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 POLQO75417 2590 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ABCA1O95477 2261 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 AKIRIN2Q53H80 203 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 FBLN7Q53RD9 439 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ACSM6Q6P461 480 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 FAM110DQ8TAY7 271 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 RCC1LQ96I51 464 aaKnown RBP9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 FAM210AQ96ND0 272 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 CITED4Q96RK1 184 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ATP6V0BQ99437 205 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 RNF2Q99496 336 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 TRGV9Q99603 122 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ACTR3CQ9C0K3 210 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 HRH4Q9H3N8 390 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 FNDC4Q9H6D8 234 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 ASH1LQ9NR48 2969 aaKnown RBP9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 SLC45A2Q9UMX9 530 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 PXMP4Q9Y6I8 212 aa9.72□□□□□ -0.85
NEDD8-MDP1-203ENST00000604306 IGLV11-55A0A075B6I3 123 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ANKRD34BA5PLL1 514 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 I3L2K1 104 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ZP3P21754 424 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 FCGR2BP31994 310 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 FHITP49789 147 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 PPT1P50897 306 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 MFAP2P55001 183 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 B2MP61769 119 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 SPSB3Q6PJ21 355 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 OR10G4Q8NGN3 311 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 OR10G9Q8NGN4 311 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 OR10G7Q8NGN6 311 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 OR4X1Q8NH49 305 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 WNT10AQ9GZT5 417 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 SLC39A9Q9NUM3 307 aa9.71□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 IGKV1OR2-108A0A075B7D4 117 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 IGHV3OR16-10A0A075B7F0 116 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TRAV30A0A087WSZ9 112 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TCRBV4S1A1TA0A5B7 111 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 H3BUX3 64 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 SCGB2A1O75556 95 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 IGF1P05019 195 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 REG1AP05451 166 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 CD5P06127 495 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms