RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 CTRB2Q6GPI1 263 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 BTNL8Q6UX41 500 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 ZNF709Q8N972 641 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 SGMS2Q8NHU3 365 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 MISP3Q96FF7 219 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 PSMG3Q9BT73 122 aaPredicted RBP14.23□□□□□ -0.13
VRK3-225ENST00000601912 WNT10AQ9GZT5 417 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 PARP11Q9NR21 331 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 MYO9AB2RTY4 2548 aa14.23□□□□□ -0.13
VRK3-225ENST00000601912 C17orf112F2Z3M2 114 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 AMY1AP04745 511 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 CRYGCP07315 174 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 SULT1A2P50226 295 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 RAB5CP51148 216 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 TREML4Q6UXN2 200 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 SLC16A13Q7RTY0 426 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 TTC9CQ8N5M4 171 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 LFNGQ8NES3 379 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 SLC35E1Q96K37 410 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 TMEM68Q96MH6 324 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 RSG1Q9BU20 258 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 PRDM13Q9H4Q3 707 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 TIMM9Q9Y5J7 89 aa14.22□□□□□ -0.13
VRK3-225ENST00000601912 RPS10-NUDT3A0A1W2PQS6 291 aa14.21□□□□□ -0.13
VRK3-225ENST00000601912 UMAD1C9J7I0 102 aa14.21□□□□□ -0.13
VRK3-225ENST00000601912 EGR2P11161 476 aaPredicted RBP14.21□□□□□ -0.13
VRK3-225ENST00000601912 MDKP21741 143 aaPredicted RBP14.21□□□□□ -0.13
VRK3-225ENST00000601912 RAB31Q13636 194 aa14.21□□□□□ -0.13
VRK3-225ENST00000601912 TEPPQ6URK8 271 aa14.21□□□□□ -0.13
VRK3-225ENST00000601912 TMEM182Q6ZP80 229 aaPredicted RBP14.21□□□□□ -0.13
VRK3-225ENST00000601912 IL17RELQ6ZVW7 336 aa14.21□□□□□ -0.13
VRK3-225ENST00000601912 PCNPQ8WW12 178 aaKnown RBP14.21□□□□□ -0.13
VRK3-225ENST00000601912 FBXO7Q9Y3I1 522 aa14.21□□□□□ -0.13
VRK3-225ENST00000601912 SH2D7A6NKC9 451 aaPredicted RBP14.2□□□□□ -0.14
VRK3-225ENST00000601912 ZNF705EA8MWA4 302 aaPredicted RBP14.2□□□□□ -0.14
VRK3-225ENST00000601912 ATP6V0E1O15342 81 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 NMBP08949 121 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 FAM157CP0CG43 387 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 MFAP2P55001 183 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 SERF2P84101 59 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 GAMTQ14353 236 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 C9orf152Q5JTZ5 239 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 ASPHD1Q5U4P2 390 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 TMEM144Q7Z5S9 345 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 ZNF48Q96MX3 618 aaPredicted RBP14.2□□□□□ -0.14
VRK3-225ENST00000601912 TMUB1Q9BVT8 246 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 NPCDR1Q9BY65 106 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 PRH1P02810 166 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 MLANAQ16655 118 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 AKR1C8PQ5T2L2 129 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 UNQ5815/PRO19632Q6UWF5 114 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 C19orf35Q6ZS72 473 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 CENPVQ7Z7K6 275 aaPredicted RBP14.2□□□□□ -0.14
VRK3-225ENST00000601912 VPREB3Q9UKI3 123 aa14.2□□□□□ -0.14
VRK3-225ENST00000601912 TLN2Q9Y4G6 2542 aa14.19□□□□□ -0.14
VRK3-225ENST00000601912 TRIM77I1YAP6 450 aa14.19□□□□□ -0.14
VRK3-225ENST00000601912 ECSCRQ19T08 205 aa14.19□□□□□ -0.14
VRK3-225ENST00000601912 AKIRIN2Q53H80 203 aa14.19□□□□□ -0.14
VRK3-225ENST00000601912 SAT2Q96F10 170 aaPredicted RBP14.19□□□□□ -0.14
VRK3-225ENST00000601912 FNDC4Q9H6D8 234 aaPredicted RBP14.19□□□□□ -0.14
VRK3-225ENST00000601912 LSM4Q9Y4Z0 139 aaKnown RBP14.19□□□□□ -0.14
VRK3-225ENST00000601912 RFNGQ9Y644 331 aa14.19□□□□□ -0.14
VRK3-225ENST00000601912 SOX15O60248 233 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 BLOC1S1P78537 153 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 SCGB2A2Q13296 93 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 RBMS3Q6XE24 437 aaKnown RBP14.18□□□□□ -0.14
VRK3-225ENST00000601912 OR5T1Q8NG75 326 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 OR2T6Q8NHC8 308 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 ACY3Q96HD9 319 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 KCNIP2Q9NS61 270 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 TNFRSF19Q9NS68 423 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 TMEM160Q9NX00 188 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 PLA2G2EQ9NZK7 142 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 THYN1Q9P016 225 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 AKAP9Q99996 3911 aa14.18□□□□□ -0.14
VRK3-225ENST00000601912 ZNF469Q96JG9 3925 aaPredicted RBP14.18□□□□□ -0.14
VRK3-225ENST00000601912 HOXA3O43365 443 aaPredicted RBP14.17□□□□□ -0.14
VRK3-225ENST00000601912 MT-CO2P00403 227 aa14.17□□□□□ -0.14
VRK3-225ENST00000601912 CAMLGP49069 296 aa14.17□□□□□ -0.14
VRK3-225ENST00000601912 SLC35E3Q7Z769 313 aa14.17□□□□□ -0.14
VRK3-225ENST00000601912 FAM110DQ8TAY7 271 aaPredicted RBP14.17□□□□□ -0.14
VRK3-225ENST00000601912 DMRT1Q9Y5R6 373 aa14.17□□□□□ -0.14
VRK3-225ENST00000601912 ACANP16112 2415 aa14.17□□□□□ -0.14
VRK3-225ENST00000601912 LINC01548A6NM66 108 aa14.17□□□□□ -0.14
VRK3-225ENST00000601912 IGHG2P01859 326 aa14.17□□□□□ -0.14
VRK3-225ENST00000601912 SIGLECL1Q8N7X8 197 aa14.17□□□□□ -0.14
VRK3-225ENST00000601912 MGST2Q99735 147 aa14.17□□□□□ -0.14
VRK3-225ENST00000601912 AGPAT2O15120 278 aa14.16□□□□□ -0.14
VRK3-225ENST00000601912 MBP02144 154 aa14.16□□□□□ -0.14
VRK3-225ENST00000601912 HIST1H1BP16401 226 aaKnown RBP14.16□□□□□ -0.14
VRK3-225ENST00000601912 CRIP2P52943 208 aaPredicted RBP14.16□□□□□ -0.14
VRK3-225ENST00000601912 BLCAPP62952 87 aa14.16□□□□□ -0.14
VRK3-225ENST00000601912 DPPA3Q6W0C5 159 aa14.16□□□□□ -0.14
VRK3-225ENST00000601912 NPIPB3Q92617 1050 aa14.16□□□□□ -0.14
VRK3-225ENST00000601912 IGLV11-55A0A075B6I3 123 aa14.15□□□□□ -0.14
VRK3-225ENST00000601912 TRAV41A0A0B4J266 112 aa14.15□□□□□ -0.14
VRK3-225ENST00000601912 I3L2K1 104 aa14.15□□□□□ -0.14
VRK3-225ENST00000601912 IGHV3-48P01763 117 aa14.15□□□□□ -0.14
VRK3-225ENST00000601912 IGF1P05019 195 aa14.15□□□□□ -0.14
VRK3-225ENST00000601912 RND2P52198 227 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms