RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 MCUBQ9NWR8 336 aa13.19□□□□□ -0.3
IRF3-230ENST00000601809 PRR13Q9NZ81 148 aa13.19□□□□□ -0.3
IRF3-230ENST00000601809 MLXQ9UH92 298 aa13.19□□□□□ -0.3
IRF3-230ENST00000601809 IGHV3-35A0A0C4DH35 117 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 CTSGP08311 255 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 FRMD6-AS1P0C7T7 363 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 IGHV4-30-4P0DP06 118 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 ELLP55199 621 aaPredicted RBP13.18□□□□□ -0.3
IRF3-230ENST00000601809 AP3S2P59780 193 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 BAK1Q16611 211 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 TM4SF20Q53R12 229 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 TMEM268Q5VZI3 342 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 SPSB3Q6PJ21 355 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 SGPP2Q8IWX5 399 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 OR52E5Q8NH55 327 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 RRNAD1Q96FB5 475 aaKnown RBP13.18□□□□□ -0.3
IRF3-230ENST00000601809 SCGB3A2Q96PL1 93 aa13.18□□□□□ -0.3
IRF3-230ENST00000601809 TECRQ9NZ01 308 aaKnown RBP13.18□□□□□ -0.3
IRF3-230ENST00000601809 MT-CO2P00403 227 aa13.17□□□□□ -0.3
IRF3-230ENST00000601809 FAUP35544 74 aaKnown RBP13.17□□□□□ -0.3
IRF3-230ENST00000601809 ERHP84090 104 aaKnown RBP13.17□□□□□ -0.3
IRF3-230ENST00000601809 NMSQ5H8A3 153 aa13.17□□□□□ -0.3
IRF3-230ENST00000601809 SLC35G3Q8N808 338 aa13.17□□□□□ -0.3
IRF3-230ENST00000601809 ASCL2Q99929 193 aa13.17□□□□□ -0.3
IRF3-230ENST00000601809 NDUFA13Q9P0J0 144 aa13.17□□□□□ -0.3
IRF3-230ENST00000601809 CACNG5Q9UF02 275 aa13.17□□□□□ -0.3
IRF3-230ENST00000601809 NDUFA4O00483 81 aa13.16□□□□□ -0.3
IRF3-230ENST00000601809 IFNA17P01571 189 aa13.16□□□□□ -0.3
IRF3-230ENST00000601809 SPCS3P61009 180 aa13.16□□□□□ -0.3
IRF3-230ENST00000601809 SPANXN2Q5MJ10 180 aa13.16□□□□□ -0.3
IRF3-230ENST00000601809 UXS1Q8NBZ7 420 aa13.16□□□□□ -0.3
IRF3-230ENST00000601809 MISP3Q96FF7 219 aa13.16□□□□□ -0.3
IRF3-230ENST00000601809 TXN2Q99757 166 aa13.16□□□□□ -0.3
IRF3-230ENST00000601809 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.16□□□□□ -0.3
IRF3-230ENST00000601809 ZNF320A2RRD8 509 aa13.15□□□□□ -0.3
IRF3-230ENST00000601809 TMEM61Q8N0U2 210 aa13.15□□□□□ -0.3
IRF3-230ENST00000601809 MARC2Q969Z3 335 aa13.15□□□□□ -0.3
IRF3-230ENST00000601809 WDR89Q96FK6 387 aaPredicted RBP13.15□□□□□ -0.3
IRF3-230ENST00000601809 SLC25A21Q9BQT8 299 aaPredicted RBP13.15□□□□□ -0.3
IRF3-230ENST00000601809 FNDC4Q9H6D8 234 aaPredicted RBP13.15□□□□□ -0.3
IRF3-230ENST00000601809 MRPL27Q9P0M9 148 aaKnown RBP13.15□□□□□ -0.3
IRF3-230ENST00000601809 KCNIP3Q9Y2W7 256 aa13.15□□□□□ -0.3
IRF3-230ENST00000601809 A0A0B4J2A0 478 aa13.14□□□□□ -0.31
IRF3-230ENST00000601809 IGHV3-48P01763 117 aa13.14□□□□□ -0.31
IRF3-230ENST00000601809 AKR1C4P17516 323 aa13.14□□□□□ -0.31
IRF3-230ENST00000601809 MFAP4P55083 255 aa13.14□□□□□ -0.31
IRF3-230ENST00000601809 LINC00322Q6ZN03 302 aaPredicted RBP13.14□□□□□ -0.31
IRF3-230ENST00000601809 LYZL2Q7Z4W2 148 aa13.14□□□□□ -0.31
IRF3-230ENST00000601809 DYNLRB2Q8TF09 96 aa13.14□□□□□ -0.31
IRF3-230ENST00000601809 TMEM170AQ8WVE7 144 aa13.14□□□□□ -0.31
IRF3-230ENST00000601809 PALMDQ9NP74 551 aa13.14□□□□□ -0.31
IRF3-230ENST00000601809 MRPL36Q9P0J6 103 aaKnown RBP13.14□□□□□ -0.31
IRF3-230ENST00000601809 SHPKQ9UHJ6 478 aa13.14□□□□□ -0.31
IRF3-230ENST00000601809 UFC1Q9Y3C8 167 aa13.14□□□□□ -0.31
IRF3-230ENST00000601809 SELENOKQ9Y6D0 94 aa13.14□□□□□ -0.31
IRF3-230ENST00000601809 K7EMT4 169 aa13.13□□□□□ -0.31
IRF3-230ENST00000601809 CD7P09564 240 aa13.13□□□□□ -0.31
IRF3-230ENST00000601809 HOXA1P49639 335 aaPredicted RBP13.13□□□□□ -0.31
IRF3-230ENST00000601809 Q56UQ5 140 aa13.13□□□□□ -0.31
IRF3-230ENST00000601809 TMEM128Q5BJH2 165 aa13.13□□□□□ -0.31
IRF3-230ENST00000601809 ZNF57Q68EA5 555 aaPredicted RBP13.13□□□□□ -0.31
IRF3-230ENST00000601809 BTNL8Q6UX41 500 aa13.13□□□□□ -0.31
IRF3-230ENST00000601809 LRTM2Q8N967 370 aa13.13□□□□□ -0.31
IRF3-230ENST00000601809 RNASE11Q8TAA1 199 aaKnown RBP13.13□□□□□ -0.31
IRF3-230ENST00000601809 OR10C1Q96KK4 312 aa13.13□□□□□ -0.31
IRF3-230ENST00000601809 PDCD10Q9BUL8 212 aa13.13□□□□□ -0.31
IRF3-230ENST00000601809 GAR1Q9NY12 217 aaKnown RBP13.13□□□□□ -0.31
IRF3-230ENST00000601809 KMT2CQ8NEZ4 4911 aaKnown RBP13.12□□□□□ -0.31
IRF3-230ENST00000601809 BTCP35070 178 aa13.12□□□□□ -0.31
IRF3-230ENST00000601809 SNCAP37840 140 aa13.12□□□□□ -0.31
IRF3-230ENST00000601809 ANKRD55Q3KP44 614 aa13.12□□□□□ -0.31
IRF3-230ENST00000601809 UBAC2Q8NBM4 344 aa13.12□□□□□ -0.31
IRF3-230ENST00000601809 TM2D3Q9BRN9 247 aa13.12□□□□□ -0.31
IRF3-230ENST00000601809 DAZ1Q9NQZ3 744 aaKnown RBP13.12□□□□□ -0.31
IRF3-230ENST00000601809 HSPB7Q9UBY9 170 aa13.12□□□□□ -0.31
IRF3-230ENST00000601809 U3KQK5 164 aa13.12□□□□□ -0.31
IRF3-230ENST00000601809 C15orf62A8K5M9 175 aa13.11□□□□□ -0.31
IRF3-230ENST00000601809 PITX3O75364 302 aa13.11□□□□□ -0.31
IRF3-230ENST00000601809 SULT1A3P0DMM9 295 aa13.11□□□□□ -0.31
IRF3-230ENST00000601809 SULT1A4P0DMN0 295 aa13.11□□□□□ -0.31
IRF3-230ENST00000601809 CCR6P51684 374 aa13.11□□□□□ -0.31
IRF3-230ENST00000601809 MLANAQ16655 118 aa13.11□□□□□ -0.31
IRF3-230ENST00000601809 C2orf83Q53S99 150 aa13.11□□□□□ -0.31
IRF3-230ENST00000601809 GTSCR1Q86UQ5 136 aa13.11□□□□□ -0.31
IRF3-230ENST00000601809 LGI3Q8N145 548 aa13.11□□□□□ -0.31
IRF3-230ENST00000601809 PINX1Q96BK5 328 aaKnown RBP13.11□□□□□ -0.31
IRF3-230ENST00000601809 NEURL2Q9BR09 285 aa13.11□□□□□ -0.31
IRF3-230ENST00000601809 IGHV3OR16-8A0A075B7F1 116 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 TRAV25A0A0B4J276 109 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 DUXBA0A1W2PPF3 345 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 CORTO00230 105 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 NUPL2O15504 423 aaKnown RBP13.1□□□□□ -0.31
IRF3-230ENST00000601809 TMEM50AO95807 157 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 HTR2BP41595 481 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 CD81P60033 236 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 SRPXP78539 464 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 TNFRSF9Q07011 255 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 PPP1R1AQ13522 171 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 SMCO1Q147U7 214 aa13.1□□□□□ -0.31
IRF3-230ENST00000601809 RBMS2Q15434 407 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms