RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 FAM106AQ4KMX7 169 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 ZNF114Q8NC26 417 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 DYNLRB2Q8TF09 96 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 SCARB1Q8WTV0 552 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 S100ZQ8WXG8 99 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 HEYLQ9NQ87 328 aaPredicted RBP9.77□□□□□ -0.85
USE1-209ENST00000601592 PTTG2Q9NZH5 202 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 SHPKQ9UHJ6 478 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 FLVCR2Q9UPI3 526 aa9.77□□□□□ -0.85
USE1-209ENST00000601592 PRKDCP78527 4128 aaKnown RBP9.76□□□□□ -0.85
USE1-209ENST00000601592 PIGBOS1A0A0B4J2F0 54 aa9.76□□□□□ -0.85
USE1-209ENST00000601592 LYRM1O43325 122 aa9.76□□□□□ -0.85
USE1-209ENST00000601592 SFT2D2O95562 160 aa9.76□□□□□ -0.85
USE1-209ENST00000601592 MT-CO2P00403 227 aa9.76□□□□□ -0.85
USE1-209ENST00000601592 CSN3P07498 182 aa9.76□□□□□ -0.85
USE1-209ENST00000601592 SMCO1Q147U7 214 aa9.76□□□□□ -0.85
USE1-209ENST00000601592 ANKRD55Q3KP44 614 aa9.76□□□□□ -0.85
USE1-209ENST00000601592 OR1S1Q8NH92 325 aa9.76□□□□□ -0.85
USE1-209ENST00000601592 BSCL2Q96G97 398 aaPredicted RBP9.76□□□□□ -0.85
USE1-209ENST00000601592 CCDC32Q9BV29 185 aa9.76□□□□□ -0.85
USE1-209ENST00000601592 IGLV1-51P01701 117 aa9.75□□□□□ -0.85
USE1-209ENST00000601592 RNASE2P10153 161 aaKnown RBP9.75□□□□□ -0.85
USE1-209ENST00000601592 GP9P14770 177 aa9.75□□□□□ -0.85
USE1-209ENST00000601592 BTCP35070 178 aa9.75□□□□□ -0.85
USE1-209ENST00000601592 MFAP4P55083 255 aa9.75□□□□□ -0.85
USE1-209ENST00000601592 NMSQ5H8A3 153 aa9.75□□□□□ -0.85
USE1-209ENST00000601592 IL34Q6ZMJ4 242 aa9.75□□□□□ -0.85
USE1-209ENST00000601592 GPHB5Q86YW7 130 aa9.75□□□□□ -0.85
USE1-209ENST00000601592 OR52E5Q8NH55 327 aa9.75□□□□□ -0.85
USE1-209ENST00000601592 CACNG8Q8WXS5 425 aa9.75□□□□□ -0.85
USE1-209ENST00000601592 BATF3Q9NR55 127 aa9.75□□□□□ -0.85
USE1-209ENST00000601592 TGP01266 2768 aa9.75□□□□□ -0.85
USE1-209ENST00000601592 DUXBA0A1W2PPF3 345 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 C2orf70A6NJV1 201 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 INS-IGF2F8WCM5 200 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 I3L2K1 104 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 PLA2G10O15496 165 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 NUPL2O15504 423 aaKnown RBP9.74□□□□□ -0.85
USE1-209ENST00000601592 GNG7O60262 68 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 HOXB5P09067 269 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 ANXA7P20073 488 aaKnown RBP9.74□□□□□ -0.85
USE1-209ENST00000601592 EDN2P20800 178 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 OPRK1P41145 380 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 UBE2MP61081 183 aaKnown RBP9.74□□□□□ -0.85
USE1-209ENST00000601592 DCTN2Q13561 401 aaKnown RBP9.74□□□□□ -0.85
USE1-209ENST00000601592 C4orf46Q504U0 113 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 SPSB3Q6PJ21 355 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 LINC00299Q6ZSB3 139 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 WDR12Q9GZL7 423 aaKnown RBP9.74□□□□□ -0.85
USE1-209ENST00000601592 HIPK2Q9H2X6 1198 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 PALMDQ9NP74 551 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 GAR1Q9NY12 217 aaKnown RBP9.74□□□□□ -0.85
USE1-209ENST00000601592 SELENOKQ9Y6D0 94 aa9.74□□□□□ -0.85
USE1-209ENST00000601592 IGHV3OR16-8A0A075B7F1 116 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 C9orf170A2RU37 121 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 LGALS9O00182 355 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 CORTO00230 105 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 FOLR2P14207 255 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 HTR2BP41595 481 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 TNFRSF9Q07011 255 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 ZNF846Q147U1 533 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 AARDQ4LEZ3 155 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 TM4SF20Q53R12 229 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 LCN12Q6JVE5 192 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 C11orf87Q6NUJ2 197 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 UNQ9165/PRO28630Q6UXU0 137 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 SLC24A4Q8NFF2 622 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 CHRDL1Q9BU40 450 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 C20orf24Q9BUV8 137 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 C20orf85Q9H1P6 137 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 RBKSQ9H477 322 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 CACFD1Q9UGQ2 172 aa9.73□□□□□ -0.85
USE1-209ENST00000601592 TRAV6A0A075B6T7 132 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 A0A1B0GU03 582 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 TMEM213A2RRL7 107 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 F8W735 103 aaPredicted RBP9.72□□□□□ -0.85
USE1-209ENST00000601592 IFNA10P01566 189 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 OR4E1P0C645 316 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 DHRS2Q13268 280 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 ADAMTSL5Q6ZMM2 481 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 LYG2Q86SG7 212 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 LRTM2Q8N967 370 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 DUSP18Q8NEJ0 188 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 COQ8AQ8NI60 647 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 DTD1Q8TEA8 209 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 SIGLEC8Q9NYZ4 499 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 UFC1Q9Y3C8 167 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 TMED3Q9Y3Q3 217 aa9.72□□□□□ -0.85
USE1-209ENST00000601592 FAM240BA0A1B0GVZ2 78 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 IZUMO1RA6ND01 250 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 A8MWP6 167 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 NDUFA4O00483 81 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 ZNF207O43670 478 aaKnown RBP9.71□□□□□ -0.86
USE1-209ENST00000601592 YIF1AO95070 293 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 CBLN1P23435 193 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 NPY1RP25929 384 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 ADMP35318 185 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 NPBWR1P48145 328 aa9.71□□□□□ -0.86
USE1-209ENST00000601592 RELQ04864 619 aaPredicted RBP9.71□□□□□ -0.86
USE1-209ENST00000601592 CD69Q07108 199 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms