RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 PVRIGQ6DKI7 326 aa10.89□□□□□ -0.67
IRF3-229ENST00000601373 ETFRF1Q6IPR1 90 aa10.89□□□□□ -0.67
IRF3-229ENST00000601373 DPPA3Q6W0C5 159 aa10.89□□□□□ -0.67
IRF3-229ENST00000601373 ZNF709Q8N972 641 aa10.89□□□□□ -0.67
IRF3-229ENST00000601373 OR1P1Q8NH06 330 aa10.89□□□□□ -0.67
IRF3-229ENST00000601373 ABHD5Q8WTS1 349 aa10.89□□□□□ -0.67
IRF3-229ENST00000601373 RBM14Q96PK6 669 aaKnown RBP10.89□□□□□ -0.67
IRF3-229ENST00000601373 P2RX4Q99571 388 aa10.89□□□□□ -0.67
IRF3-229ENST00000601373 SH3BGRL3Q9H299 93 aa10.89□□□□□ -0.67
IRF3-229ENST00000601373 PITPNC1Q9UKF7 332 aa10.89□□□□□ -0.67
IRF3-229ENST00000601373 SMCO3A2RU48 225 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 FSHBP01225 129 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 PRH1P02810 166 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 CX3CL1P78423 397 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 RUNX1Q01196 453 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 CD69Q07108 199 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 RAB31Q13636 194 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 FBLN7Q53RD9 439 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 BTNL8Q6UX41 500 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 TMEM182Q6ZP80 229 aaPredicted RBP10.88□□□□□ -0.67
IRF3-229ENST00000601373 C9orf139Q6ZV77 190 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 PIFOQ8TCI5 191 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 PCNPQ8WW12 178 aaKnown RBP10.88□□□□□ -0.67
IRF3-229ENST00000601373 SSMEM1Q8WWF3 244 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 ARPC1AQ92747 370 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 SLC25A33Q9BSK2 321 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 PARP11Q9NR21 331 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 PLA2G2EQ9NZK7 142 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 MOB4Q9Y3A3 225 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 FBXO7Q9Y3I1 522 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 PLXNB1O43157 2135 aa10.88□□□□□ -0.67
IRF3-229ENST00000601373 KRBOX1C9JBD0 128 aa10.87□□□□□ -0.67
IRF3-229ENST00000601373 CYB5BO43169 146 aa10.87□□□□□ -0.67
IRF3-229ENST00000601373 MBP02144 154 aa10.87□□□□□ -0.67
IRF3-229ENST00000601373 AREGP15514 252 aa10.87□□□□□ -0.67
IRF3-229ENST00000601373 CAMLGP49069 296 aa10.87□□□□□ -0.67
IRF3-229ENST00000601373 TREML4Q6UXN2 200 aa10.87□□□□□ -0.67
IRF3-229ENST00000601373 C16orf82Q7Z2V1 217 aa10.87□□□□□ -0.67
IRF3-229ENST00000601373 TMEM144Q7Z5S9 345 aa10.87□□□□□ -0.67
IRF3-229ENST00000601373 EIF4E3Q8N5X7 224 aaKnown RBP10.87□□□□□ -0.67
IRF3-229ENST00000601373 KCNIP2Q9NS61 270 aa10.87□□□□□ -0.67
IRF3-229ENST00000601373 F11RQ9Y624 299 aaKnown RBP10.87□□□□□ -0.67
IRF3-229ENST00000601373 FN1P02751 2386 aaKnown RBP10.86□□□□□ -0.67
IRF3-229ENST00000601373 A6NDX4 124 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 M0QZK8 103 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 CRYGCP07315 174 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 CTRB1P17538 263 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 AKR1C1Q04828 323 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 ARSJQ5FYB0 599 aaPredicted RBP10.86□□□□□ -0.67
IRF3-229ENST00000601373 CTRB2Q6GPI1 263 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 TEPPQ6URK8 271 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 CCDC28AQ8IWP9 274 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 SLC35E1Q96K37 410 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 TMEM68Q96MH6 324 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 MDFIQ99750 246 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 RSG1Q9BU20 258 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 NPCDR1Q9BY65 106 aa10.86□□□□□ -0.67
IRF3-229ENST00000601373 ABCA1O95477 2261 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 IGHV7-81A0A0B4J1V7 117 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 NPIPB5A8MRT5 1133 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 H3BUX3 64 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 REG1AP05451 166 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 PXDC1Q5TGL8 231 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 Q6ZRG5 221 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 Q71RC1 249 aaPredicted RBP10.85□□□□□ -0.67
IRF3-229ENST00000601373 SLC16A13Q7RTY0 426 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 TTC9CQ8N5M4 171 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 C5orf56Q8N8D9 126 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 CXorf58Q96LI9 332 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 SMR3AQ99954 134 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 WNT10AQ9GZT5 417 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 LSM4Q9Y4Z0 139 aaKnown RBP10.85□□□□□ -0.67
IRF3-229ENST00000601373 COL6A5A8TX70 2615 aa10.85□□□□□ -0.67
IRF3-229ENST00000601373 TEX46H3BTG2 121 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 I3L521 148 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 SMAD7O15105 426 aaKnown RBP10.84□□□□□ -0.67
IRF3-229ENST00000601373 DEFA4P12838 97 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 OPRK1P41145 380 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 GAMTQ14353 236 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 DEFB112Q30KQ8 113 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 TMEM41BQ5BJD5 291 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 UQCC3Q6UW78 93 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 PRIMA1Q86XR5 153 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 CIARTQ8N365 385 aaPredicted RBP10.84□□□□□ -0.67
IRF3-229ENST00000601373 OR5R1Q8NH85 324 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 SGMS2Q8NHU3 365 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 C22orf15Q8WYQ4 148 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 MISP3Q96FF7 219 aa10.84□□□□□ -0.67
IRF3-229ENST00000601373 HIVEP2P31629 2446 aa10.83□□□□□ -0.68
IRF3-229ENST00000601373 RAB2AP61019 212 aa10.83□□□□□ -0.68
IRF3-229ENST00000601373 ACOT6Q3I5F7 207 aaPredicted RBP10.83□□□□□ -0.68
IRF3-229ENST00000601373 IL34Q6ZMJ4 242 aa10.83□□□□□ -0.68
IRF3-229ENST00000601373 COMMD1Q8N668 190 aa10.83□□□□□ -0.68
IRF3-229ENST00000601373 LYPD6BQ8NI32 183 aa10.83□□□□□ -0.68
IRF3-229ENST00000601373 FAM213BQ8TBF2 198 aa10.83□□□□□ -0.68
IRF3-229ENST00000601373 MARC2Q969Z3 335 aa10.83□□□□□ -0.68
IRF3-229ENST00000601373 FAM103A1Q9BTL3 118 aaKnown RBP10.83□□□□□ -0.68
IRF3-229ENST00000601373 RFNGQ9Y644 331 aa10.83□□□□□ -0.68
IRF3-229ENST00000601373 SOX21Q9Y651 276 aaPredicted RBP10.83□□□□□ -0.68
IRF3-229ENST00000601373 STAB1Q9NY15 2570 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms