RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TMEM50AO95807 157 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 MT-CO2P00403 227 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 KRASP01116 189 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 IGKV1-39P01597 117 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 AMBPP02760 352 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 IGKV1D-39P04432 117 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 CD5P06127 495 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 FCER2P06734 321 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 CLEC2LP0C7M8 214 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 MIFP14174 115 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 C4BPBP20851 252 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 G6PCP35575 357 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 FXYD4P59646 89 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 ARPC4P59998 168 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 RELQ04864 619 aaPredicted RBP4.39□□□□□ -1.71
VRK3-220ENST00000600259 LGALS9BQ3B8N2 356 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 SFXN4Q6P4A7 337 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 TPRA1Q86W33 373 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 UBAC2Q8NBM4 344 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 ZNF114Q8NC26 417 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 DUSP18Q8NEJ0 188 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 OR5AP2Q8NGF4 316 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 LGALS14Q8TCE9 139 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 SLC25A46Q96AG3 418 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 HINT2Q9BX68 163 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 DAPK2Q9UIK4 370 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 ANAPC10Q9UM13 185 aa4.39□□□□□ -1.71
VRK3-220ENST00000600259 DEFB131BA0A096LNP1 70 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 A0A0A6YYH2 397 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 IGHV3-66A0A0C4DH42 116 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 A6NJ64 397 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 KNCNA6PVL3 124 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 M0R2N4 97 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 ST8SIA3O43173 380 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 SNAPC5O75971 98 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 YIF1AO95070 293 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 NAT1P18440 290 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 SDC2P34741 201 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 RFX2P48378 723 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 SCAND1P57086 179 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 PAFAH1B2P68402 229 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 AADACL3Q5VUY0 350 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 UBE2UQ5VVX9 321 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 MORN3Q6PF18 240 aaPredicted RBP4.38□□□□□ -1.71
VRK3-220ENST00000600259 ZNF767PQ75MW2 155 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 TMEM17Q86X19 198 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 ZNF575Q86XF7 245 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 LYSMD2Q8IV50 215 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 DCANP1Q8TF63 244 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 MOB3AQ96BX8 217 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 GRAMD2BQ96HH9 432 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 SEC22AQ96IW7 307 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 TMEM56Q96MV1 263 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 CMTM3Q96MX0 182 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 VCXQ9H320 206 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 RNF167Q9H6Y7 350 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 FKBP11Q9NYL4 201 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 MRPL36Q9P0J6 103 aaKnown RBP4.38□□□□□ -1.71
VRK3-220ENST00000600259 PRNDQ9UKY0 176 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 PUS1Q9Y606 427 aaKnown RBP eCLIP4.38□□□□□ -1.71
VRK3-220ENST00000600259 U3KQE9 123 aa4.38□□□□□ -1.71
VRK3-220ENST00000600259 APOBP04114 4563 aaKnown RBP4.38□□□□□ -1.71
VRK3-220ENST00000600259 MEIS3P1A6NDR6 274 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 INS-IGF2F8WCM5 200 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 DNASE2O00115 360 aaPredicted RBP4.37□□□□□ -1.71
VRK3-220ENST00000600259 CD74P04233 296 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 RLN1P04808 185 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 P0C879 139 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 P0DMU3 169 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 FAM231AP0DMU4 169 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 FAM231CP0DMU5 169 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 SPP1P10451 314 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 CRYBB3P26998 211 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 ERVK-16P61578 105 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 HSPE1P61604 102 aaKnown RBP4.37□□□□□ -1.71
VRK3-220ENST00000600259 PRCDQ00LT1 54 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 MLANAQ16655 118 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 TMEM41BQ5BJD5 291 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 ZNF600Q6ZNG1 722 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 STHQ8IWL8 128 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 MISP3Q96FF7 219 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 RAB40CQ96S21 281 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 GINS3Q9BRX5 216 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 ZNF2Q9BSG1 426 aaPredicted RBP4.37□□□□□ -1.71
VRK3-220ENST00000600259 FNDC4Q9H6D8 234 aaPredicted RBP4.37□□□□□ -1.71
VRK3-220ENST00000600259 FAM212BQ9NTI7 297 aaPredicted RBP4.37□□□□□ -1.71
VRK3-220ENST00000600259 CLEC5AQ9NY25 188 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 DNAH5Q8TE73 4624 aa4.37□□□□□ -1.71
VRK3-220ENST00000600259 ANKRD65E5RJM6 399 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 GPR31O00270 319 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 GNG7O60262 68 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 IGKV1-17P01599 117 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 ZNF688P0C7X2 276 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 CBX5P45973 191 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 PPP5CP53041 499 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 HERV-K104P61576 105 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 MXD1Q05195 221 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 IZUMO4Q1ZYL8 232 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 SPARTQ8N0X7 666 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 BORCS5Q969J3 196 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms