RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 OSTCQ9NRP0 149 aa12.14□□□□□ -0.47
SYMPK-215ENST00000600237 ACACAQ13085 2346 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 IGKV3D-15A0A087WSY6 115 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 IGKV3-15P01624 115 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 TRGV3P03979 118 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 MORN2Q502X0 79 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 C9orf106Q8NAJ2 232 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 WNT10AQ9GZT5 417 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 NYNRINQ9P2P1 1898 aaKnown RBP12.13□□□□□ -0.47
SYMPK-215ENST00000600237 SAA2-SAA4A0A096LPE2 208 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 H7C1H1 209 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 LDLRAD4O15165 306 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 SMIM13P0DJ93 91 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 SAA2P0DJI9 122 aaPredicted RBP12.13□□□□□ -0.47
SYMPK-215ENST00000600237 LY6EQ16553 131 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 GEMIN7Q9H840 131 aaKnown RBP12.13□□□□□ -0.47
SYMPK-215ENST00000600237 IGKV1D-8A0A087WSZ0 117 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 A0A0G2JLM5 398 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 BSPH1Q075Z2 132 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 CD5P06127 495 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 FAM74A4Q5TZK3 123 aa12.13□□□□□ -0.47
SYMPK-215ENST00000600237 SRSF3P84103 164 aaKnown RBP12.12□□□□□ -0.47
SYMPK-215ENST00000600237 ORMDL3Q8N138 153 aa12.12□□□□□ -0.47
SYMPK-215ENST00000600237 ARPC1AQ92747 370 aa12.12□□□□□ -0.47
SYMPK-215ENST00000600237 OTORQ9NRC9 128 aa12.12□□□□□ -0.47
SYMPK-215ENST00000600237 IGKV1D-33P01593 117 aa12.12□□□□□ -0.47
SYMPK-215ENST00000600237 IGKV1-33P01594 117 aa12.12□□□□□ -0.47
SYMPK-215ENST00000600237 Q9H3A6 140 aa12.12□□□□□ -0.47
SYMPK-215ENST00000600237 TMEM242Q9NWH2 141 aa12.12□□□□□ -0.47
SYMPK-215ENST00000600237 HIGD1CA8MV81 97 aa12.12□□□□□ -0.47
SYMPK-215ENST00000600237 ASIPP42127 132 aa12.12□□□□□ -0.47
SYMPK-215ENST00000600237 ABCA1O95477 2261 aa12.12□□□□□ -0.47
SYMPK-215ENST00000600237 ROS1P08922 2347 aa12.12□□□□□ -0.47
SYMPK-215ENST00000600237 GATA2P23769 480 aaPredicted RBP12.11□□□□□ -0.47
SYMPK-215ENST00000600237 C14orf144Q96I85 54 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 TMEM160Q9NX00 188 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 DUTP33316 252 aaKnown RBP12.11□□□□□ -0.47
SYMPK-215ENST00000600237 ZIC4Q8N9L1 334 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 DEPPQ9NTK1 212 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 MOB4Q9Y3A3 225 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 SERF1AO75920 110 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 FAM166AQ6J272 317 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 TCF23Q7RTU1 214 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 NDUFAF3Q9BU61 184 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 IGHV3OR16-13A0A075B7E8 117 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 IGHV3-74A0A0B4J1X5 117 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 TRAV8-6A0A0B4J262 113 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 IGKV1-12A0A0C4DH73 117 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 CEACAM4O75871 244 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 IGKV1D-12P01611 117 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 CD69Q07108 199 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 PVRIGQ6DKI7 326 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 PPP1R27Q86WC6 154 aa12.11□□□□□ -0.47
SYMPK-215ENST00000600237 TRBV24-1A0A075B6N3 115 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 TRAV1-1A0A0B4J248 108 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HIST1H2BKO60814 126 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HIST1H2BJP06899 126 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HIST1H2BOP23527 126 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HIST1H2BBP33778 126 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HIST1H2BDP58876 126 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HIST1H2BCP62807 126 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 PRCDQ00LT1 54 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HIST2H2BEQ16778 126 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.1□□□□□ -0.47
SYMPK-215ENST00000600237 FER1L6-AS1Q8NA97 138 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HIST1H2BHQ93079 126 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HIST1H2BNQ99877 126 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HIST1H2BMQ99879 126 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 SBF1O95248 1867 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 NAPSAO96009 420 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 C1QTNF9P0C862 333 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 SAMD13Q5VXD3 122 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 NRN1Q9NPD7 142 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 MRPS16Q9Y3D3 137 aaKnown RBP12.1□□□□□ -0.47
SYMPK-215ENST00000600237 THSD7BQ9C0I4 1608 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 MED12Q93074 2177 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 IGHV3OR16-12A0A075B7B8 117 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 UBE2CO00762 179 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 HEPN1Q6WQI6 88 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 RNASE6Q93091 150 aaKnown RBP12.1□□□□□ -0.47
SYMPK-215ENST00000600237 DUX5Q96PT3 197 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 EFNA2O43921 213 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 SUPT4H1P63272 117 aaKnown RBP12.1□□□□□ -0.47
SYMPK-215ENST00000600237 C18orf15Q96N68 181 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 WFDC1Q9HC57 220 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 SEMA5BQ9P283 1151 aa12.1□□□□□ -0.47
SYMPK-215ENST00000600237 M0R381 172 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 RAMP3O60896 148 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 NABP1Q96AH0 204 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 CCL3L1P16619 93 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 GPR183P32249 361 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 CD55P08174 381 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 MEIG1Q5JSS6 88 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 ZNF600Q6ZNG1 722 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 SCN8AQ9UQD0 1980 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 A0A1B0GW64 132 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 TCRBV4S1A1TA0A5B7 111 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 TMEM190Q8WZ59 177 aa12.09□□□□□ -0.47
SYMPK-215ENST00000600237 NBR2O15453 112 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms