RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 OR4A16Q8NH70 328 aa15.48■□□□□ 0.07
PNKP-212ENST00000599454 VSIRQ9H7M9 311 aa15.48■□□□□ 0.07
PNKP-212ENST00000599454 TMEM69Q5SWH9 247 aa15.47■□□□□ 0.07
PNKP-212ENST00000599454 H2BFWTQ7Z2G1 175 aa15.47■□□□□ 0.07
PNKP-212ENST00000599454 IGHV3OR16-13A0A075B7E8 117 aa15.46■□□□□ 0.07
PNKP-212ENST00000599454 IGHV3-74A0A0B4J1X5 117 aa15.46■□□□□ 0.07
PNKP-212ENST00000599454 C11orf94C9JXX5 98 aa15.46■□□□□ 0.07
PNKP-212ENST00000599454 TAS2R20P59543 309 aa15.46■□□□□ 0.07
PNKP-212ENST00000599454 ERHP84090 104 aaKnown RBP15.46■□□□□ 0.07
PNKP-212ENST00000599454 TOMM20LQ6UXN7 152 aa15.46■□□□□ 0.07
PNKP-212ENST00000599454 SEC22AQ96IW7 307 aa15.46■□□□□ 0.07
PNKP-212ENST00000599454 HRH4Q9H3N8 390 aa15.46■□□□□ 0.07
PNKP-212ENST00000599454 DNAH6Q9C0G6 4158 aa15.46■□□□□ 0.06
PNKP-212ENST00000599454 DNASE2O00115 360 aaPredicted RBP15.45■□□□□ 0.06
PNKP-212ENST00000599454 ST8SIA3O43173 380 aa15.45■□□□□ 0.06
PNKP-212ENST00000599454 PRSS3P35030 304 aa15.45■□□□□ 0.06
PNKP-212ENST00000599454 NPBWR1P48145 328 aa15.45■□□□□ 0.06
PNKP-212ENST00000599454 HSPE1P61604 102 aaKnown RBP15.45■□□□□ 0.06
PNKP-212ENST00000599454 PHLDA2Q53GA4 152 aa15.45■□□□□ 0.06
PNKP-212ENST00000599454 TMEM41BQ5BJD5 291 aa15.45■□□□□ 0.06
PNKP-212ENST00000599454 DUSP18Q8NEJ0 188 aa15.45■□□□□ 0.06
PNKP-212ENST00000599454 ST8SIA2Q92186 375 aa15.45■□□□□ 0.06
PNKP-212ENST00000599454 PINX1Q96BK5 328 aaKnown RBP15.45■□□□□ 0.06
PNKP-212ENST00000599454 MS4A6AQ9H2W1 248 aa15.45■□□□□ 0.06
PNKP-212ENST00000599454 TMEM231Q9H6L2 316 aa15.45■□□□□ 0.06
PNKP-212ENST00000599454 VPS13DQ5THJ4 4388 aa15.45■□□□□ 0.06
PNKP-212ENST00000599454 HRH1P35367 487 aa15.44■□□□□ 0.06
PNKP-212ENST00000599454 DEFB131AP59861 70 aa15.44■□□□□ 0.06
PNKP-212ENST00000599454 PRR20EP86478 221 aa15.44■□□□□ 0.06
PNKP-212ENST00000599454 PRR20CP86479 221 aa15.44■□□□□ 0.06
PNKP-212ENST00000599454 PRR20DP86480 221 aa15.44■□□□□ 0.06
PNKP-212ENST00000599454 PRR20BP86481 221 aa15.44■□□□□ 0.06
PNKP-212ENST00000599454 PRR20AP86496 221 aa15.44■□□□□ 0.06
PNKP-212ENST00000599454 ZNF600Q6ZNG1 722 aa15.44■□□□□ 0.06
PNKP-212ENST00000599454 TBC1D26Q86UD7 250 aa15.44■□□□□ 0.06
PNKP-212ENST00000599454 DEFB4AO15263 64 aa15.43■□□□□ 0.06
PNKP-212ENST00000599454 IGHV3-48P01763 117 aa15.43■□□□□ 0.06
PNKP-212ENST00000599454 TSPAN5P62079 268 aa15.43■□□□□ 0.06
PNKP-212ENST00000599454 LYSMD2Q8IV50 215 aa15.43■□□□□ 0.06
PNKP-212ENST00000599454 SAMD12Q8N8I0 201 aa15.43■□□□□ 0.06
PNKP-212ENST00000599454 APLNQ9ULZ1 77 aa15.43■□□□□ 0.06
PNKP-212ENST00000599454 HLA-DMAP28067 261 aa15.42■□□□□ 0.06
PNKP-212ENST00000599454 RPL11P62913 178 aaKnown RBP15.42■□□□□ 0.06
PNKP-212ENST00000599454 NEDD8Q15843 81 aa15.42■□□□□ 0.06
PNKP-212ENST00000599454 LEMD1Q68G75 181 aa15.42■□□□□ 0.06
PNKP-212ENST00000599454 STHQ8IWL8 128 aa15.42■□□□□ 0.06
PNKP-212ENST00000599454 Q8NAQ8 132 aa15.42■□□□□ 0.06
PNKP-212ENST00000599454 ZFAND3Q9H8U3 227 aa15.42■□□□□ 0.06
PNKP-212ENST00000599454 PUS1Q9Y606 427 aaKnown RBP eCLIP15.42■□□□□ 0.06
PNKP-212ENST00000599454 HECTD4Q9Y4D8 3996 aa15.42■□□□□ 0.06
PNKP-212ENST00000599454 A0A1W2PS18 150 aa15.41■□□□□ 0.06
PNKP-212ENST00000599454 IGLL5B9A064 214 aa15.41■□□□□ 0.06
PNKP-212ENST00000599454 IGKV1-39P01597 117 aa15.41■□□□□ 0.06
PNKP-212ENST00000599454 APOHP02749 345 aaPredicted RBP15.41■□□□□ 0.06
PNKP-212ENST00000599454 IGKV1D-39P04432 117 aa15.41■□□□□ 0.06
PNKP-212ENST00000599454 UCP3P55916 312 aa15.41■□□□□ 0.06
PNKP-212ENST00000599454 LILRB2Q8N423 598 aa15.41■□□□□ 0.06
PNKP-212ENST00000599454 MRGPRFQ96AM1 343 aa15.41■□□□□ 0.06
PNKP-212ENST00000599454 INS-IGF2F8WCM5 200 aa15.4■□□□□ 0.06
PNKP-212ENST00000599454 CORTO00230 105 aa15.4■□□□□ 0.06
PNKP-212ENST00000599454 SNCAP37840 140 aa15.4■□□□□ 0.06
PNKP-212ENST00000599454 MORN3Q6PF18 240 aaPredicted RBP15.4■□□□□ 0.06
PNKP-212ENST00000599454 GPX8Q8TED1 209 aa15.4■□□□□ 0.06
PNKP-212ENST00000599454 TMEM50AO95807 157 aa15.39■□□□□ 0.05
PNKP-212ENST00000599454 SPP1P10451 314 aa15.39■□□□□ 0.05
PNKP-212ENST00000599454 MIFP14174 115 aa15.39■□□□□ 0.05
PNKP-212ENST00000599454 CENPSQ8N2Z9 138 aa15.39■□□□□ 0.05
PNKP-212ENST00000599454 GRAMD2BQ96HH9 432 aa15.39■□□□□ 0.05
PNKP-212ENST00000599454 SCPEP1Q9HB40 452 aa15.39■□□□□ 0.05
PNKP-212ENST00000599454 RABAC1Q9UI14 185 aa15.39■□□□□ 0.05
PNKP-212ENST00000599454 IGHV3-66A0A0C4DH42 116 aa15.38■□□□□ 0.05
PNKP-212ENST00000599454 SCGB2A1O75556 95 aa15.38■□□□□ 0.05
PNKP-212ENST00000599454 NPPCP23582 126 aa15.38■□□□□ 0.05
PNKP-212ENST00000599454 RPS19P39019 145 aaKnown RBP15.38■□□□□ 0.05
PNKP-212ENST00000599454 SUB1P53999 127 aaKnown RBP eCLIP15.38■□□□□ 0.05
PNKP-212ENST00000599454 PVRIGQ6DKI7 326 aa15.38■□□□□ 0.05
PNKP-212ENST00000599454 TRPT1Q86TN4 253 aaKnown RBP15.38■□□□□ 0.05
PNKP-212ENST00000599454 FAM24BQ8N5W8 94 aa15.38■□□□□ 0.05
PNKP-212ENST00000599454 IGHV4-28A0A0C4DH34 117 aa15.37■□□□□ 0.05
PNKP-212ENST00000599454 K7EQG2 157 aa15.37■□□□□ 0.05
PNKP-212ENST00000599454 KCTD21Q4G0X4 260 aa15.37■□□□□ 0.05
PNKP-212ENST00000599454 SLC35G3Q8N808 338 aa15.37■□□□□ 0.05
PNKP-212ENST00000599454 METTL26Q96S19 204 aa15.37■□□□□ 0.05
PNKP-212ENST00000599454 TRAV10A0A0B4J240 114 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 A0A1B0GU03 582 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 SMIM31A0A1B0GVY4 71 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 ZNF705EA8MWA4 302 aaPredicted RBP15.36■□□□□ 0.05
PNKP-212ENST00000599454 ATG12O94817 140 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 ATP6V1G2O95670 118 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 GIG44P09565 113 aaPredicted RBP15.36■□□□□ 0.05
PNKP-212ENST00000599454 RBMY1A1P0DJD3 496 aaKnown RBP15.36■□□□□ 0.05
PNKP-212ENST00000599454 RBMY1CP0DJD4 496 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 HLA-DMBP28068 263 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 RCVRNP35243 200 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 TGFBR1P36897 503 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 RBMY1FQ15415 496 aaKnown RBP15.36■□□□□ 0.05
PNKP-212ENST00000599454 LINC00336Q6ZUF6 198 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 STXBP6Q8NFX7 210 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 ZNF486Q96H40 463 aaPredicted RBP15.36■□□□□ 0.05
PNKP-212ENST00000599454 NARS2Q96I59 477 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms